CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00101p00150740
(
Amborella trichopoda
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
AMTR_s00101p00150740
T030527_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07858.1
M01123_2.00
Cannabis sativa
HCACGTGB
VCACGTGD
PBM
Lambert et al.(2019)
pTH11370
0.869
0.714
PK20225.1
M01128_2.00
Cannabis sativa
NCACGTGVN
NBCACGTGN
PBM
Lambert et al.(2019)
pTH11274
0.840
0.673
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERM99122
bHLH
79
127
LRSHSEAEKRRRERINGHFDKLRHLLPSNVKRDKASLLAEAIRRLKELK
Links
Other
bHLH
family TFs
Other
Amborella trichopoda
TFs
100 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy