TF Information

MYC2 *(Arabidopsis thaliana)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	AT1G32640	T030597_2.00	Ensembl (2018-Dec-8)	Link out
NCBI Gene Info: Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif and interacts with Jasmonate ZIM-domain proteins. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue light#Aeimediated photomorphogenic growth and blue and far-red-light#Aeiregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression.
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYC2 M01699_2.00	Arabidopsis thaliana	NNCACGTGNN	NNCACGTGNN	PBM Weirauch et al.(2014) pTH8083	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PK18474.1 M01127_2.00	Cannabis sativa	NRCACGTGCN	NGCACGTGYN	PBM Lambert et al.(2019) pTH10273	0.914	0.979
PK18474.1 M01768_2.00	Cannabis sativa	NCACGWK	MWCGTGN	PBM Weirauch et al.(2014) pTH9589	0.914	0.979
MYC3 M01712_2.00	Arabidopsis thaliana	MWYGTGNNNN	NNNNCACRWK	PBM Weirauch et al.(2014) pTH8854	0.914	0.958
MYC4 M01707_2.00	Arabidopsis thaliana	NNCACGTGNN	NNCACGTGNN	PBM Weirauch et al.(2014) pTH8260	0.914	0.938
OS01G0235700 M09894_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$BHLH66_01	0.890	0.896
BHLH13 M01698_2.00	Arabidopsis thaliana	MCACGTGV	BCACGTGK	PBM Weirauch et al.(2014) pTH7565	0.879	0.896
AT2G22750 M06730_2.00	Arabidopsis thaliana	MRYGTKDNHCACGTGNN	NNCACGTGDNHMACRYK	Dap-seq OMalley et al.(2016) bHLH18_col_a	0.858	0.604
PK09702.1 M01124_2.00	Cannabis sativa	GCACGTGV	BCACGTGC	PBM Lambert et al.(2019) pTH11374	0.840	0.646
BHLH14 M09785_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AT4G00870_01	0.840	0.771
For this family, TFs with SR scores > 0.838* will likely have a similar motif*