TF Information

BIM2 *(Arabidopsis thaliana)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	AT1G69010	T030610_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
BIM2 M01701_2.00	Arabidopsis thaliana	NNCACGTGNN	NNCACGTGNN	PBM Weirauch et al.(2014) pTH8089	(Direct)	(Direct)
BIM2 M06727_2.00	Arabidopsis thaliana	CACGTGHBNNNNNNNNNNN	NNNNNNNNNNNVDCACGTG	Dap-seq OMalley et al.(2016) BIM2_colamp	(Direct)	(Direct)
BIM2 M06728_2.00	Arabidopsis thaliana	CACGTGMBNNNCVYV	BRBGNNNVKCACGTG	Dap-seq OMalley et al.(2016) BIM2_col_v3b	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
BIM1 M01710_2.00	Arabidopsis thaliana	NCRCGTGNNN	NNNCACGYGN	PBM Weirauch et al.(2014) pTH8114	0.894	0.804
BIM1 M06739_2.00	Arabidopsis thaliana	CACGTGAYNHNNNH	DNNNDNRTCACGTG	Dap-seq OMalley et al.(2016) BIM1_col_a	0.894	0.804
BIM1 M06740_2.00	Arabidopsis thaliana	NVKCACGTGMYHHNHNHNHNNN	NNNDNDNDNDDRKCACGTGMBN	Dap-seq OMalley et al.(2016) BIM1_colamp_a	0.894	0.804
BIM1 M09787_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$BIM1_01	0.894	0.804
fgenesh1_pg.scaffold_37000071 M01757_2.00	Physcomitrella patens	NNCACGTGNN	NNCACGTGNN	PBM Weirauch et al.(2014) pTH8584	0.861	0.765
SPT M01709_2.00	Arabidopsis thaliana	NCACGTGSN	NSCACGTGN	PBM Weirauch et al.(2014) pTH8111	0.851	0.490
UNE10 M01705_2.00	Arabidopsis thaliana	HCACGTGM	KCACGTGD	PBM Weirauch et al.(2014) pTH8112	0.843	0.471
For this family, TFs with SR scores > 0.838* will likely have a similar motif*