FIT (Arabidopsis thaliana)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AT2G28160 T030623_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a putative transcription factor that regulates iron uptake responses. mRNA is detected in the outer cell layers of the root and accumulates in response to iron deficiency. The expression of many iron-regulated genes is dependent on FIT1. It specifically regulates FRO2 at the level of mRNA accumulation and IRT1 at the level of protein accumulation.Similar to FER in tomato and is a regulator of iron uptake. It is post-transcriptionally controlled.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G28160.1 bHLH 123 177
AT2G28160.2 bHLH 123 177

Links

Other bHLH family TFs
Other Arabidopsis thaliana TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Thhalv10016957m.g Eutrema salsugineum Thhalv10016957m.g N 0.914
FIT1 Arabidopsis lyrata fgenesh2_kg.4__753__AT2G28160.1 N 0.914
gene24607-v1.0-hybrid Fragaria vesca gene24607-v1.0-hybrid N 0.914
Carubv10023654m.g Capsella rubella Carubv10023654m.g N 0.914
Bostr.27991s0112 Boechera stricta Bostr.27991s0112 N 0.914
Cagra.12562s0002 Capsella grandiflora Cagra.12562s0002 N 0.914
Bra011972 Brassica rapa Bra011972 N 0.914
MTR_2g084280 Medicago truncatula MTR_2g084280 N 0.914
Bo4g071850 Brassica oleracea Bo4g071850 N 0.914
Bo3g040310 Brassica oleracea Bo3g040310 N 0.914
Bra000495 Brassica rapa Bra000495 N 0.914
evm.TU.contig_28125.2 Carica papaya evm.TU.contig_28125.2 N 0.894
PDK_20s1479721g001 Phoenix dactylifera PDK_20s1479721g001 N 0.894
FIT1 Populus trichocarpa POPTR_0009s01100 N 0.894
TCM_041590 Theobroma cacao TCM_041590 N 0.894
Cla008847 Citrullus lanatus Cla008847 N 0.894
cassava28523.m1 Manihot esculenta cassava28523.m1 N 0.894
Cucsa.385700 Cucumis sativus Cucsa.385700 N 0.894
Eucgr.B03931 Eucalyptus grandis Eucgr.B03931 N 0.894
chr3.CM0396.580.nc Lotus japonicus chr3.CM0396.580.nc N 0.894
SapurV1A.1382s0060 Salix purpurea SapurV1A.1382s0060 N 0.894
PK26582.1 Cannabis sativa PK26582.1 N 0.894
chr3.CM0070.320.nc Lotus japonicus chr3.CM0070.320.nc N 0.894
GLYMA13G39650 Glycine max GLYMA13G39650 N 0.894
Gorai.009G090400 Gossypium raimondii Gorai.009G090400 N 0.894
gene24608-v1.0-hybrid Fragaria vesca gene24608-v1.0-hybrid N 0.894
Pm001154 Prunus mume Pm001154 N 0.891
PRUPE_ppa018718mg Prunus persica PRUPE_ppa018718mg N 0.891
Bo4g165090 Brassica oleracea Bo4g165090 N 0.890
MTR_4g057270 Medicago truncatula MTR_4g057270 N 0.890
Bra034392 Brassica rapa Bra034392 N 0.890
GLYMA12G30240 Glycine max GLYMA12G30240 N 0.883
PGSC0003DMG400019017 Solanum tuberosum PGSC0003DMG400019017 N 0.883
Solyc06g051550.2 Solanum lycopersicum Solyc06g051550.2 N 0.883
mgf022253m Mimulus guttatus mgf022253m N 0.876
mgf025442m Mimulus guttatus mgf025442m N 0.876
FIT1 Vitis vinifera VIT_06s0061g00720 N 0.870
Pavir.J28741 Panicum virgatum Pavir.J28741 N 0.870
Aquca_019_00196 Aquilegia coerulea Aquca_019_00196 N 0.870
Traes_2DL_47E8C44C6 Triticum aestivum Traes_2DL_47E8C44C6 N 0.870
Si010533m.g Setaria italica Si010533m.g N 0.870
MLOC_6707 Hordeum vulgare MLOC_6707 N 0.870
LPERR04G07210 Leersia perrieri LPERR04G07210 N 0.870
OB04G17410 Oryza brachyantha OB04G17410 N 0.870
Traes_2BL_F442E87DD Triticum aestivum Traes_2BL_F442E87DD N 0.870
OGLUM04G09730 Oryza glumaepatula OGLUM04G09730 N 0.870
GSMUA_Achr6G27600_001 Musa acuminata GSMUA_Achr6G27600_001 N 0.870
GRMZM2G173521 Zea mays GRMZM2G173521 N 0.870
BRADI5G07720 Brachypodium distachyon BRADI5G07720 N 0.870
GLYMA11G19850 Glycine max GLYMA11G19850 N 0.870
GLYMA12G08640 Glycine max GLYMA12G08640 N 0.870
GRMZM2G107672 Zea mays GRMZM2G107672 N 0.870
OLONG_016577 Oryza longistaminata OLONG_016577 N 0.870
OBART04G10120 Oryza barthii OBART04G10120 N 0.870
ORUFI04G11150 Oryza rufipogon ORUFI04G11150 N 0.870
Si010468m.g Setaria italica Si010468m.g N 0.870
Sb06g012030 Sorghum bicolor Sb06g012030 N 0.870
OS04G0381700 Oryza sativa OS04G0381700 N 0.870
ORGLA04G0072000 Oryza glaberrima ORGLA04G0072000 N 0.870
ORGLA02G0343900 Oryza glaberrima ORGLA02G0343900 N 0.870
Traes_2AL_088338613 Triticum aestivum Traes_2AL_088338613 N 0.870
ONIVA04G07960 Oryza nivara ONIVA04G07960 N 0.870
OPUNC04G08160 Oryza punctata OPUNC04G08160 N 0.870
Pavir.Ga01979 Panicum virgatum Pavir.Ga01979 N 0.867
orange1.1g042465m.g Citrus sinensis orange1.1g042465m.g N 0.859
Ciclev10029810m.g Citrus clementina Ciclev10029810m.g N 0.859
Lus10016151.g Linum usitatissimum Lus10016151.g N 0.859
orange1.1g021355m.g Citrus sinensis orange1.1g021355m.g N 0.859
Ciclev10030052m.g Citrus clementina Ciclev10030052m.g N 0.859
AMTR_s00102p00056000 Amborella trichopoda AMTR_s00102p00056000 N 0.855
AMTR_s00102p00046460 Amborella trichopoda AMTR_s00102p00046460 N 0.855
Ca_17453 Cicer arietinum Ca_17453 N 0.846
Pavir.J29678 Panicum virgatum Pavir.J29678 N 0.846
PK27980.1 Cannabis sativa PK27980.1 N 0.840