SCRM (Arabidopsis thaliana)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AT3G26744 T030649_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCRM
M09784_2.00		 Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ICE1_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AMS
M09782_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AMS_01 		0.847 0.833
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G26744.1 bHLH 306 353
AT3G26744.2 bHLH 306 353
AT3G26744.4 bHLH 306 353
AT3G26744.5 bHLH 306 339
AT3G26744.6 bHLH 306 353

Links

Other bHLH family TFs
Other Arabidopsis thaliana TFs

Invalid Input OrderBy

245 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action