CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORG2
(
Arabidopsis thaliana
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
AT3G56970
T030655_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Encodes a member of the basic helix-loop-helix transcription factor protein.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT3G56970.1
bHLH
72
124
KKLNHNASERDRRKKINTLFSSLRSCLPASDQSKKLSIPETVSKSLKYIPELQ
Links
Other
bHLH
family TFs
Other
Arabidopsis thaliana
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.20505s0056
Boechera stricta
Bostr.20505s0056
N
0.873
BHLH038
Arabidopsis lyrata
fgenesh2_kg.5__2132__AT3G56970.1
N
0.864
27751.m000169
Ricinus communis
27751.m000169
N
0.853
Bra014657
Brassica rapa
Bra014657
N
0.846
Bo4g112590
Brassica oleracea
Bo4g112590
N
0.846
Cagra.0578s0028
Capsella grandiflora
Cagra.0578s0028
N
0.846
Carubv10017770m.g
Capsella rubella
Carubv10017770m.g
N
0.846
Bo01495s010
Brassica oleracea
Bo01495s010
N
0.846
Bostr.20505s0055
Boechera stricta
Bostr.20505s0055
N
0.846
Bra014658
Brassica rapa
Bra014658
N
0.846
BHLH039
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001751
N
0.846
Bra014654
Brassica rapa
Bra014654
N
0.846
Cagra.0578s0027
Capsella grandiflora
Cagra.0578s0027
N
0.845
Carubv10019130m.g
Capsella rubella
Carubv10019130m.g
N
0.845
Thhalv10006191m.g
Eutrema salsugineum
Thhalv10006191m.g
N
0.843
Thhalv10006189m.g
Eutrema salsugineum
Thhalv10006189m.g
N
0.843
Pm031098
Prunus mume
Pm031098
N
0.843