AT4G25400 (Arabidopsis thaliana)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AT4G25400 T030676_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT4G25400
M09786_2.00		 Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT4G25400_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT4G25400.1 bHLH 2 54
AT4G25400.2 bHLH 25 77

Links

Other bHLH family TFs
Other Arabidopsis thaliana TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.7867s0349 Boechera stricta Bostr.7867s0349 I 0.914
Bo7g110280 Brassica oleracea Bo7g110280 I 0.893
fgenesh2_kg.8__1059__AT5G51780.1 Arabidopsis lyrata fgenesh2_kg.8__1059__AT5G51780.1 I 0.893
Thhalv10026341m.g Eutrema salsugineum Thhalv10026341m.g I 0.893
AT5G51780 Arabidopsis thaliana AT5G51780 I 0.893
Gorai.006G196500 Gossypium raimondii Gorai.006G196500 I 0.881
Bra019167 Brassica rapa Bra019167 I 0.880
Thhalv10009922m.g Eutrema salsugineum Thhalv10009922m.g I 0.880
cassava43207.valid.m1 Manihot esculenta cassava43207.valid.m1 I 0.873
Cagra.0277s0021 Capsella grandiflora Cagra.0277s0021 I 0.873
Carubv10027166m.g Capsella rubella Carubv10027166m.g I 0.873
Bostr.15774s0324 Boechera stricta Bostr.15774s0324 I 0.873
POPTR_0012s14080 Populus trichocarpa POPTR_0012s14080 I 0.873
Bra022562 Brassica rapa Bra022562 I 0.869
Cagra.2248s0016 Capsella grandiflora Cagra.2248s0016 I 0.866
Carubv10006264m.g Capsella rubella Carubv10006264m.g I 0.866
MDP0000246258 Malus domestica MDP0000246258 I 0.861
Pm019419 Prunus mume Pm019419 I 0.861
Solyc06g035490.2 Solanum lycopersicum Solyc06g035490.2 I 0.861
LjSGA_023375.1 Lotus japonicus LjSGA_023375.1 I 0.861
cassava45968.m1 Manihot esculenta cassava45968.m1 I 0.860
Bo2g048240 Brassica oleracea Bo2g048240 I 0.858
fgenesh2_kg.7__1722__AT4G25400.1 Arabidopsis lyrata fgenesh2_kg.7__1722__AT4G25400.1 I 0.856
Gorai.008G282300 Gossypium raimondii Gorai.008G282300 I 0.854
BHLH125 Arabidopsis thaliana AT1G62975 I 0.850
Bostr.13671s0206 Boechera stricta Bostr.13671s0206 I 0.850
Carubv10020804m.g Capsella rubella Carubv10020804m.g I 0.850
fgenesh2_kg.2__186__AT1G62975.1 Arabidopsis lyrata fgenesh2_kg.2__186__AT1G62975.1 I 0.850
Cagra.1670s0006 Capsella grandiflora Cagra.1670s0006 I 0.850
Bostr.22157s0026 Boechera stricta Bostr.22157s0026 I 0.850
orange1.1g036406m.g Citrus sinensis orange1.1g036406m.g I 0.849
Ca_22233 Cicer arietinum Ca_22233 I 0.849
PK11667.1 Cannabis sativa PK11667.1 I 0.849
PK15358.1 Cannabis sativa PK15358.1 I 0.849
Ciclev10006628m.g Citrus clementina Ciclev10006628m.g I 0.849
GLYMA09G27610 Glycine max GLYMA09G27610 I 0.849
GLYMA16G32610 Glycine max GLYMA16G32610 I 0.849
cassava21379.m1 Manihot esculenta cassava21379.m1 I 0.849
Eucgr.F04119 Eucalyptus grandis Eucgr.F04119 I 0.846
evm.TU.supercontig_4.181 Carica papaya evm.TU.supercontig_4.181 I 0.845
Thhalv10015297m.g Eutrema salsugineum Thhalv10015297m.g I 0.845
TCM_016134 Theobroma cacao TCM_016134 I 0.845
TCM_016133 Theobroma cacao TCM_016133 I 0.845
Gorai.011G226600 Gossypium raimondii Gorai.011G226600 I 0.840