BIM3 (Arabidopsis thaliana)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AT5G38860 T030698_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes BES1-INTERACTING MYC-LIKE 3 (BIM3), a PAR1 (PHYTOCHROME RAPIDLY REGULATED 1)-interacting protein that positively modulates the shade avoidance syndrome in Arabidopsis seedlings.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BIM3
M01711_2.00		 Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8591		 (Direct) (Direct)
BIM3
M06741_2.00		 Arabidopsis thaliana
DYGTSHNNVKCACGTGMY
RKCACGTGMBNNDSACRH		 Dap-seq
OMalley et al.(2016)
BIM3_col_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.838 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01711_2.00 bHLH 34 86

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G38860.1 bHLH 34 86
AT5G38860.2 bHLH 34 86

Links

Other bHLH family TFs
Other Arabidopsis thaliana TFs

Invalid Input OrderBy

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action