BHLH28 (Arabidopsis thaliana)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AT5G46830 T030705_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Calcium-binding transcription factor involved in salt stress signaling.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BHLH28
M06742_2.00
Arabidopsis thaliana
NNNYGTACGGAH

DTCCGTACRNNN
Dap-seq
OMalley et al.(2016)
bHLH28_col_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G46830.1 bHLH 340 389

Links

Other bHLH family TFs
Other Arabidopsis thaliana TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27964.m000352 Ricinus communis 27964.m000352 I 0.844
27964.m000356 Ricinus communis 27964.m000356 I 0.844
ATNIG1 Arabidopsis lyrata Al_scaffold_0008_132 I 0.914
Aquca_037_00261 Aquilegia coerulea Aquca_037_00261 I 0.844
Bostr.28243s0053 Boechera stricta Bostr.28243s0053 I 0.856
Bostr.7365s0026 Boechera stricta Bostr.7365s0026 I 0.844
Cagra.0751s0016 Capsella grandiflora Cagra.0751s0016 I 0.894
Cagra.4923s0009 Capsella grandiflora Cagra.4923s0009 I 0.844
Carubv10001082m.g Capsella rubella Carubv10001082m.g I 0.844
Carubv10028430m.g Capsella rubella Carubv10028430m.g I 0.894
cassava29800.valid.m1 Manihot esculenta cassava29800.valid.m1 I 0.844
cassava32651.m1 Manihot esculenta cassava32651.m1 I 0.844
Ca_17603 Cicer arietinum Ca_17603 I 0.843
Ciclev10019749m.g Citrus clementina Ciclev10019749m.g I 0.844
Eucgr.B00713 Eucalyptus grandis Eucgr.B00713 I 0.856
Eucgr.E00019 Eucalyptus grandis Eucgr.E00019 I 0.844
evm.TU.supercontig_141.19 Carica papaya evm.TU.supercontig_141.19 I 0.844
gene01894-v1.0-hybrid Fragaria vesca gene01894-v1.0-hybrid I 0.856
gene18651-v1.0-hybrid Fragaria vesca gene18651-v1.0-hybrid I 0.844
GLYMA07G05740 Glycine max GLYMA07G05740 I 0.844
GLYMA16G02320 Glycine max GLYMA16G02320 I 0.844
Gorai.001G151700 Gossypium raimondii Gorai.001G151700 I 0.844
Gorai.004G149500 Gossypium raimondii Gorai.004G149500 I 0.844
Gorai.007G111800 Gossypium raimondii Gorai.007G111800 I 0.844
Gorai.008G128800 Gossypium raimondii Gorai.008G128800 I 0.844
GSMUA_Achr1G18910_001 Musa acuminata GSMUA_Achr1G18910_001 I 0.844
MDP0000137325 Malus domestica MDP0000137325 I 0.856
MDP0000183948 Malus domestica MDP0000183948 I 0.856
MDP0000224302 Malus domestica MDP0000224302 I 0.844
MDP0000242554 Malus domestica MDP0000242554 I 0.844
MDP0000442310 Malus domestica MDP0000442310 I 0.856
MDP0000710285 Malus domestica MDP0000710285 I 0.856
MDP0000729514 Malus domestica MDP0000729514 I 0.844
MDP0000859492 Malus domestica MDP0000859492 I 0.844
MDP0000900024 Malus domestica MDP0000900024 I 0.844
mgf001993m Mimulus guttatus mgf001993m I 0.844
MTR_8g024770 Medicago truncatula MTR_8g024770 I 0.856
MTR_8g024790 Medicago truncatula MTR_8g024790 I 0.856
OB07G15330 Oryza brachyantha OB07G15330 I 0.849
orange1.1g046178m.g Citrus sinensis orange1.1g046178m.g I 0.844
PGSC0003DMG400012237 Solanum tuberosum PGSC0003DMG400012237 I 0.856
PGSC0003DMG400018332 Solanum tuberosum PGSC0003DMG400018332 I 0.844
Pm023735 Prunus mume Pm023735 I 0.856
Pm023738 Prunus mume Pm023738 I 0.856
Pm028604 Prunus mume Pm028604 I 0.856
Pm028605 Prunus mume Pm028605 I 0.856
Pm028606 Prunus mume Pm028606 I 0.856
Pm028607 Prunus mume Pm028607 I 0.856
Pm029399 Prunus mume Pm029399 I 0.856
POPTR_0002s17750 Populus trichocarpa POPTR_0002s17750 I 0.844
PRUPE_ppa004680mg Prunus persica PRUPE_ppa004680mg I 0.844
PRUPE_ppa005343mg Prunus persica PRUPE_ppa005343mg I 0.856
PRUPE_ppa015634mg Prunus persica PRUPE_ppa015634mg I 0.845
PRUPE_ppa016220mg Prunus persica PRUPE_ppa016220mg I 0.856
PRUPE_ppa022165mg Prunus persica PRUPE_ppa022165mg I 0.856
PRUPE_ppa022201mg Prunus persica PRUPE_ppa022201mg I 0.856
PRUPE_ppa025417mg Prunus persica PRUPE_ppa025417mg I 0.856
PRUPE_ppa027182mg Prunus persica PRUPE_ppa027182mg I 0.856
SapurV1A.0003s0670 Salix purpurea SapurV1A.0003s0670 I 0.844
Solyc01g096370.2 Solanum lycopersicum Solyc01g096370.2 I 0.844
Solyc08g083170.1 Solanum lycopersicum Solyc08g083170.1 I 0.856
TCM_005064 Theobroma cacao TCM_005064 I 0.844
VIT_02s0025g02610 Vitis vinifera VIT_02s0025g02610 I 0.844
VIT_15s0048g02820 Vitis vinifera VIT_15s0048g02820 I 0.844