CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo2g001330
(
Brassica oleracea
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Bo2g001330
T031089_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo2g001330.1
bHLH
47
92
QSVAARERRHRISDRLKILQSMVPGGAKLDTVSMLDEAINYVKFLK
Links
Other
bHLH
family TFs
Other
Brassica oleracea
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra028895
Brassica rapa
Bra028895
N
0.914
MDP0000436338
Malus domestica
MDP0000436338
N
0.902
MDP0000178778
Malus domestica
MDP0000178778
N
0.902
MTR_7g069590
Medicago truncatula
MTR_7g069590
N
0.900
Bostr.6251s0101
Boechera stricta
Bostr.6251s0101
N
0.890
Aquca_045_00179
Aquilegia coerulea
Aquca_045_00179
N
0.890
Cagra.4082s0011
Capsella grandiflora
Cagra.4082s0011
N
0.890
evm.TU.supercontig_120.27
Carica papaya
evm.TU.supercontig_120.27
N
0.890
Cucsa.130030
Cucumis sativus
Cucsa.130030
N
0.890
POPTR_0006s10350
Populus trichocarpa
POPTR_0006s10350
N
0.890
AT5G01305
Arabidopsis thaliana
AT5G01305
N
0.890
Pm002868
Prunus mume
Pm002868
N
0.890
cassava41569.m1
Manihot esculenta
cassava41569.m1
N
0.890
PRUPE_ppa025490mg
Prunus persica
PRUPE_ppa025490mg
N
0.890
POPTR_0016s12830
Populus trichocarpa
POPTR_0016s12830
N
0.890
Gorai.012G117300
Gossypium raimondii
Gorai.012G117300
N
0.890
VIT_08s0058g00110
Vitis vinifera
VIT_08s0058g00110
N
0.890
SapurV1A.0001s0420
Salix purpurea
SapurV1A.0001s0420
N
0.890
SapurV1A.0905s0090
Salix purpurea
SapurV1A.0905s0090
N
0.890
GLYMA03G06792
Glycine max
GLYMA03G06792
N
0.890
GLYMA01G30660
Glycine max
GLYMA01G30660
N
0.890
Ca_09396
Cicer arietinum
Ca_09396
N
0.890
GSMUA_Achr4G18820_001
Musa acuminata
GSMUA_Achr4G18820_001
N
0.890
Thhalv10012562m.g
Eutrema salsugineum
Thhalv10012562m.g
N
0.890
TCM_021641
Theobroma cacao
TCM_021641
N
0.890
LjSGA_012662.1
Lotus japonicus
LjSGA_012662.1
N
0.890
Cla018363
Citrullus lanatus
Cla018363
N
0.890
APTX
Arabidopsis lyrata
fgenesh2_kg.6__80__AT5G01310.1
N
0.869
gene13480-v1.0-hybrid
Fragaria vesca
gene13480-v1.0-hybrid
N
0.869
Lus10003386.g
Linum usitatissimum
Lus10003386.g
N
0.868
Pavir.J06869
Panicum virgatum
Pavir.J06869
N
0.868
Pavir.Ea03297
Panicum virgatum
Pavir.Ea03297
N
0.868
Si004520m.g
Setaria italica
Si004520m.g
N
0.868
OBART01G36050
Oryza barthii
OBART01G36050
N
0.868
OGLUM01G39950
Oryza glumaepatula
OGLUM01G39950
N
0.868
OMERI01G33130
Oryza meridionalis
OMERI01G33130
N
0.868
TRAES3BF030600030CFD_g
Triticum aestivum
TRAES3BF030600030CFD_g
N
0.868
MLOC_54157
Hordeum vulgare
MLOC_54157
N
0.868
LPERR01G31030
Leersia perrieri
LPERR01G31030
N
0.868
BRADI2G54030
Brachypodium distachyon
BRADI2G54030
N
0.868
GLYMA0732S00200
Glycine max
GLYMA0732S00200
N
0.868
GRMZM2G397518
Zea mays
GRMZM2G397518
N
0.868
OPUNC01G34850
Oryza punctata
OPUNC01G34850
N
0.868
ONIVA01G41030
Oryza nivara
ONIVA01G41030
N
0.868
Sb03g038820
Sorghum bicolor
Sb03g038820
N
0.868
Traes_3B_D6EA106A51
Triticum aestivum
Traes_3B_D6EA106A51
N
0.868
TRAES3BF030500010CFD_g
Triticum aestivum
TRAES3BF030500010CFD_g
N
0.868
ORGLA01G0299600
Oryza glaberrima
ORGLA01G0299600
N
0.868
LAX
Oryza sativa
OS01G0831000
N
0.868
ORUFI01G39410
Oryza rufipogon
ORUFI01G39410
N
0.868
ORGLA06G0253200
Oryza glaberrima
ORGLA06G0253200
N
0.868
Solyc09g005070.1
Solanum lycopersicum
Solyc09g005070.1
N
0.863
BGIOSGA004736
Oryza indica
BGIOSGA004736
N
0.856
mg005373m
Mimulus guttatus
mg005373m
N
0.845
GLYMA07G18651
Glycine max
GLYMA07G18651
N
0.844
Lus10002213.g
Linum usitatissimum
Lus10002213.g
N
0.842