Bo2g032920 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo2g032920 T031093_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK15505.1
M01125_2.00
Cannabis sativa
NRCACGTGYN

NRCACGTGYN
PBM
Lambert et al.(2019)
pTH10268
0.858 0.837
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g032920.1 bHLH 266 314

Links

Other bHLH family TFs
Other Brassica oleracea TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bostr.26833s0565 Boechera stricta Bostr.26833s0565 I 0.903
Bra035639 Brassica rapa Bra035639 I 0.903
Al_scaffold_0008_2143 Arabidopsis lyrata Al_scaffold_0008_2143 I 0.903
AT5G56960 Arabidopsis thaliana AT5G56960 I 0.903
Carubv10026331m.g Capsella rubella Carubv10026331m.g I 0.882
Aquca_020_00438 Aquilegia coerulea Aquca_020_00438 I 0.882
gene12658-v1.0-hybrid Fragaria vesca gene12658-v1.0-hybrid I 0.882
Thhalv10013360m.g Eutrema salsugineum Thhalv10013360m.g I 0.882
Cagra.1569s0004 Capsella grandiflora Cagra.1569s0004 I 0.882
OPUNC05G05910 Oryza punctata OPUNC05G05910 I 0.869
GLYMA09G07391 Glycine max GLYMA09G07391 I 0.866
GLYMA15G18580 Glycine max GLYMA15G18580 I 0.866
LjT02N03.60.nd Lotus japonicus LjT02N03.60.nd I 0.866
GRMZM2G175480 Zea mays GRMZM2G175480 N 0.861
Pm027191 Prunus mume Pm027191 I 0.858
Cucsa.117060 Cucumis sativus Cucsa.117060 I 0.858
MDP0000782908 Malus domestica MDP0000782908 I 0.858
PK15505.1 Cannabis sativa PK15505.1 D 0.858
orange1.1g008967m.g Citrus sinensis orange1.1g008967m.g I 0.858
Cla017100 Citrullus lanatus Cla017100 I 0.858
Eucgr.C03476 Eucalyptus grandis Eucgr.C03476 I 0.858
Ciclev10007937m.g Citrus clementina Ciclev10007937m.g I 0.858
VIT_11s0016g02070 Vitis vinifera VIT_11s0016g02070 I 0.858
GSMUA_Achr6G00900_001 Musa acuminata GSMUA_Achr6G00900_001 I 0.858
PRUPE_ppa020972mg Prunus persica PRUPE_ppa020972mg I 0.858
MDP0000252899 Malus domestica MDP0000252899 I 0.857
MDP0000119495 Malus domestica MDP0000119495 I 0.857
POPTR_0006s15310 Populus trichocarpa POPTR_0006s15310 I 0.857
29912.m005337 Ricinus communis 29912.m005337 I 0.857
cassava46879.m1 Manihot esculenta cassava46879.m1 I 0.857
PGSC0003DMG400000335 Solanum tuberosum PGSC0003DMG400000335 I 0.854
cassava25701.m1 Manihot esculenta cassava25701.m1 I 0.853
TCM_037645 Theobroma cacao TCM_037645 I 0.851
BGIOSGA033976 Oryza indica BGIOSGA033976 I 0.849
OBART05G06380 Oryza barthii OBART05G06380 I 0.849
OB05G15870 Oryza brachyantha OB05G15870 I 0.849
LPERR05G05410 Leersia perrieri LPERR05G05410 I 0.849
ORUFI05G06870 Oryza rufipogon ORUFI05G06870 I 0.849
OS05G0199800 Oryza sativa OS05G0199800 I 0.849
OGLUM05G06690 Oryza glumaepatula OGLUM05G06690 I 0.849
ORGLA05G0058200 Oryza glaberrima ORGLA05G0058200 I 0.849
ONIVA05G07120 Oryza nivara ONIVA05G07120 I 0.849
mgf018190m Mimulus guttatus mgf018190m I 0.845