Bo5g006980 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo5g006980 T031191_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G42280
M06733_2.00
Arabidopsis thaliana
DNCMACTTGYH

DRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH130_col_a
0.870 0.796
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g006980.1 bHLH 290 338

Links

Other bHLH family TFs
Other Brassica oleracea TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo5g007030 Brassica oleracea Bo5g007030 I 0.914
Lus10025518.g Linum usitatissimum Lus10025518.g I 0.914
Lus10026733.g Linum usitatissimum Lus10026733.g I 0.914
Eucgr.A00213 Eucalyptus grandis Eucgr.A00213 I 0.914
Bra015456 Brassica rapa Bra015456 I 0.914
Carubv10009382m.g Capsella rubella Carubv10009382m.g I 0.911
fgenesh2_kg.1__542__AT1G05805.1 Arabidopsis lyrata fgenesh2_kg.1__542__AT1G05805.1 I 0.911
BHLH128 Arabidopsis thaliana AT1G05805 I 0.911
MTR_1g116790 Medicago truncatula MTR_1g116790 I 0.911
Ca_14007 Cicer arietinum Ca_14007 I 0.911
Bostr.25219s0385 Boechera stricta Bostr.25219s0385 I 0.911
Cucsa.094340 Cucumis sativus Cucsa.094340 I 0.911
Cagra.1671s0210 Capsella grandiflora Cagra.1671s0210 I 0.911
Thhalv10008050m.g Eutrema salsugineum Thhalv10008050m.g I 0.911
PDK_20s1546591g001 Phoenix dactylifera PDK_20s1546591g001 I 0.894
OPUNC04G14700 Oryza punctata OPUNC04G14700 I 0.891
ORGLA04G0140000 Oryza glaberrima ORGLA04G0140000 I 0.891
OGLUM04G16920 Oryza glumaepatula OGLUM04G16920 I 0.891
OBART04G16900 Oryza barthii OBART04G16900 I 0.891
ORUFI04G18350 Oryza rufipogon ORUFI04G18350 I 0.891
OMERI04G14260 Oryza meridionalis OMERI04G14260 I 0.891
TRIUR3_16394 Triticum urartu TRIUR3_16394 I 0.891
OB04G24170 Oryza brachyantha OB04G24170 I 0.891
Ciclev10020681m.g Citrus clementina Ciclev10020681m.g I 0.891
Traes_6DL_62A15AED6 Triticum aestivum Traes_6DL_62A15AED6 I 0.891
Traes_6BL_868408DFC Triticum aestivum Traes_6BL_868408DFC I 0.891
orange1.1g038558m.g Citrus sinensis orange1.1g038558m.g I 0.891
Traes_6AL_9437F730F Triticum aestivum Traes_6AL_9437F730F I 0.891
OS04G0489600 Oryza sativa OS04G0489600 I 0.891
ONIVA04G15000 Oryza nivara ONIVA04G15000 I 0.891
MLOC_12058 Hordeum vulgare MLOC_12058 I 0.891
BRADI3G48070 Brachypodium distachyon BRADI3G48070 I 0.891
F775_26506 Aegilops tauschii F775_26506 I 0.891
BGIOSGA016651 Oryza indica BGIOSGA016651 I 0.891
LPERR04G13560 Leersia perrieri LPERR04G13560 I 0.891
GSMUA_Achr8G32130_001 Musa acuminata GSMUA_Achr8G32130_001 I 0.883
GSMUA_Achr8G01370_001 Musa acuminata GSMUA_Achr8G01370_001 I 0.883
GSMUA_Achr1G27710_001 Musa acuminata GSMUA_Achr1G27710_001 I 0.883
Ca_07284 Cicer arietinum Ca_07284 I 0.882
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I 0.870
AT2G42280 Arabidopsis thaliana AT2G42280 D 0.870
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I 0.870
30169.m006403 Ricinus communis 30169.m006403 I 0.870
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I 0.870
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I 0.870
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I 0.870
MDP0000307685 Malus domestica MDP0000307685 I 0.870
LPERR09G10800 Leersia perrieri LPERR09G10800 I 0.870
Carubv10023498m.g Capsella rubella Carubv10023498m.g I 0.870
LPERR08G16800 Leersia perrieri LPERR08G16800 I 0.870
F775_24576 Aegilops tauschii F775_24576 I 0.860
ONIVA01G45730 Oryza nivara ONIVA01G45730 I 0.860
OS01G0900800 Oryza sativa OS01G0900800 I 0.860
OMERI01G37660 Oryza meridionalis OMERI01G37660 I 0.860
BRADI2G57800 Brachypodium distachyon BRADI2G57800 I 0.860
OBART01G40680 Oryza barthii OBART01G40680 I 0.860
BGIOSGA004992 Oryza indica BGIOSGA004992 I 0.860
MLOC_20318 Hordeum vulgare MLOC_20318 I 0.860
OGLUM01G44860 Oryza glumaepatula OGLUM01G44860 I 0.860
OLONG_004619 Oryza longistaminata OLONG_004619 I 0.860
TRIUR3_33816 Triticum urartu TRIUR3_33816 I 0.860
OB01G49420 Oryza brachyantha OB01G49420 I 0.860
ORUFI01G44010 Oryza rufipogon ORUFI01G44010 I 0.860
OPUNC01G39450 Oryza punctata OPUNC01G39450 I 0.860
LPERR01G35240 Leersia perrieri LPERR01G35240 I 0.860
Traes_3AL_B68C491B0 Triticum aestivum Traes_3AL_B68C491B0 I 0.860
ORGLA01G0346300 Oryza glaberrima ORGLA01G0346300 I 0.860
TRAES3BF135900010CFD_g Triticum aestivum TRAES3BF135900010CFD_g I 0.860
Pavir.J01306 Panicum virgatum Pavir.J01306 I 0.857
Sb03g042860 Sorghum bicolor Sb03g042860 I 0.857
Si001123m.g Setaria italica Si001123m.g I 0.857
GRMZM2G114873 Zea mays GRMZM2G114873 I 0.857
30149.m000231 Ricinus communis 30149.m000231 I 0.856
cassava35513.valid.m1 Manihot esculenta cassava35513.valid.m1 I 0.856
Carubv10023683m.g Capsella rubella Carubv10023683m.g I 0.853
MDP0000273574 Malus domestica MDP0000273574 I 0.853
chr5.LjT42F22.20.nc Lotus japonicus chr5.LjT42F22.20.nc I 0.853
Thhalv10016998m.g Eutrema salsugineum Thhalv10016998m.g I 0.853
Gorai.011G144600 Gossypium raimondii Gorai.011G144600 I 0.853
PK07850.1 Cannabis sativa PK07850.1 I 0.853
SapurV1A.0529s0060 Salix purpurea SapurV1A.0529s0060 I 0.853
PGSC0003DMG400006569 Solanum tuberosum PGSC0003DMG400006569 I 0.853
Bra004748 Brassica rapa Bra004748 I 0.853
fgenesh2_kg.4__2475__AT2G43140.1 Arabidopsis lyrata fgenesh2_kg.4__2475__AT2G43140.1 I 0.853
GLYMA20G39220 Glycine max GLYMA20G39220 I 0.853
Bra000291 Brassica rapa Bra000291 I 0.853
Bo4g019620 Brassica oleracea Bo4g019620 I 0.853
AT2G43140 Arabidopsis thaliana AT2G43140 I 0.853
Bo3g036400 Brassica oleracea Bo3g036400 I 0.853
Cagra.3706s0004 Capsella grandiflora Cagra.3706s0004 I 0.853
PRUPE_ppa025178mg Prunus persica PRUPE_ppa025178mg I 0.853
mgf005043m Mimulus guttatus mgf005043m I 0.853
Bostr.25993s0461 Boechera stricta Bostr.25993s0461 I 0.853
Pm007619 Prunus mume Pm007619 I 0.853
VIT_05s0124g00240 Vitis vinifera VIT_05s0124g00240 I 0.853
Solyc09g098110.2 Solanum lycopersicum Solyc09g098110.2 I 0.853
TCM_020066 Theobroma cacao TCM_020066 I 0.853
Bostr.25993s0551 Boechera stricta Bostr.25993s0551 I 0.848
MTR_7g092540 Medicago truncatula MTR_7g092540 I 0.843