Bo5g085170 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo5g085170 T031209_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH80
M06722_2.00 		Arabidopsis thaliana
DNCMACTTGCH
DGCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH80_col_a 		0.879 0.922
BHLH80
M06723_2.00 		Arabidopsis thaliana
DKCMACTTGCA
TGCAAGTKGMH		 Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a 		0.879 0.922
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g085170.1 bHLH 172 222

Links

Other bHLH family TFs
Other Brassica oleracea TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra034421 Brassica rapa Bra034421 I 0.914
Cagra.18223s0002 Capsella grandiflora Cagra.18223s0002 I 0.879
Cagra.9781s0002 Capsella grandiflora Cagra.9781s0002 I 0.879
Carubv10001721m.g Capsella rubella Carubv10001721m.g I 0.879
Carubv10010050m.g Capsella rubella Carubv10010050m.g I 0.879
Bostr.25463s0393 Boechera stricta Bostr.25463s0393 I 0.879
cassava13743.valid.m1 Manihot esculenta cassava13743.valid.m1 I 0.879
Cucsa.061590 Cucumis sativus Cucsa.061590 I 0.879
mgf002701m Mimulus guttatus mgf002701m I 0.879
Bostr.1774s0027 Boechera stricta Bostr.1774s0027 I 0.879
Ciclev10002083m.g Citrus clementina Ciclev10002083m.g I 0.879
gene26880-v1.0-hybrid Fragaria vesca gene26880-v1.0-hybrid I 0.879
SapurV1A.1647s0020 Salix purpurea SapurV1A.1647s0020 I 0.879
Thhalv10028883m.g Eutrema salsugineum Thhalv10028883m.g I 0.879
PK06301.1 Cannabis sativa PK06301.1 I 0.879
SapurV1A.0690s0120 Salix purpurea SapurV1A.0690s0120 I 0.879
SapurV1A.0391s0050 Salix purpurea SapurV1A.0391s0050 I 0.879
Gorai.013G138300 Gossypium raimondii Gorai.013G138300 I 0.879
MDP0000269890 Malus domestica MDP0000269890 I 0.879
orange1.1g023215m.g Citrus sinensis orange1.1g023215m.g I 0.879
Pm004181 Prunus mume Pm004181 I 0.879
VIT_18s0041g00690 Vitis vinifera VIT_18s0041g00690 I 0.879
GLYMA08G26110 Glycine max GLYMA08G26110 I 0.879
BHLH81 Arabidopsis thaliana AT4G09180 I 0.879
fgenesh2_kg.6__2924__AT4G09180.1 Arabidopsis lyrata fgenesh2_kg.6__2924__AT4G09180.1 I 0.879
Bra036760 Brassica rapa Bra036760 I 0.879
Bo8g026850 Brassica oleracea Bo8g026850 I 0.879
Bra028088 Brassica rapa Bra028088 I 0.879
Bo6g043840 Brassica oleracea Bo6g043840 I 0.879
PGSC0003DMG400031314 Solanum tuberosum PGSC0003DMG400031314 I 0.879
BHLH80 Arabidopsis thaliana AT1G35460 D 0.879
TCM_036484 Theobroma cacao TCM_036484 I 0.879
AMTR_s00070p00149100 Amborella trichopoda AMTR_s00070p00149100 I 0.879
PRUPE_ppa011017mg Prunus persica PRUPE_ppa011017mg I 0.879
Solyc06g065040.2 Solanum lycopersicum Solyc06g065040.2 I 0.879
scaffold_103992.1 Arabidopsis lyrata scaffold_103992.1 I 0.879
PGSC0003DMG400022058 Solanum tuberosum PGSC0003DMG400022058 I 0.870
Solyc11g056650.1 Solanum lycopersicum Solyc11g056650.1 I 0.870
MTR_4g033295 Medicago truncatula MTR_4g033295 I 0.852
PGSC0003DMG400023852 Solanum tuberosum PGSC0003DMG400023852 I 0.849
Solyc12g100140.1 Solanum lycopersicum Solyc12g100140.1 I 0.849
30074.m001421 Ricinus communis 30074.m001421 I 0.847