Bo8g100870 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo8g100870 T031284_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.843 0.714
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g100870.1 bHLH 125 173

Links

Other bHLH family TFs
Other Brassica oleracea TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra039927 Brassica rapa Bra039927 I 0.914
Bo4g151030 Brassica oleracea Bo4g151030 I 0.914
Bra030207 Brassica rapa Bra030207 I 0.914
Thhalv10000251m.g Eutrema salsugineum Thhalv10000251m.g N 0.888
Carubv10023610m.g Capsella rubella Carubv10023610m.g N 0.875
Cagra.0882s0006 Capsella grandiflora Cagra.0882s0006 N 0.875
NAI1 Arabidopsis lyrata fgenesh2_kg.4__198__AT2G22770.1 N 0.875
NAI1 Arabidopsis thaliana AT2G22770 N 0.875
Bostr.19427s0044 Boechera stricta Bostr.19427s0044 N 0.875
Eucgr.H02391 Eucalyptus grandis Eucgr.H02391 I 0.864
PRUPE_ppa007561mg Prunus persica PRUPE_ppa007561mg I 0.863
Lus10019247.g Linum usitatissimum Lus10019247.g I 0.863
Traes_4DS_7F3D9E4D9 Triticum aestivum Traes_4DS_7F3D9E4D9 I 0.863
Pm002304 Prunus mume Pm002304 I 0.863
TRIUR3_26880 Triticum urartu TRIUR3_26880 I 0.863
MLOC_64735 Hordeum vulgare MLOC_64735 I 0.863
Traes_4BS_34AF89ACE Triticum aestivum Traes_4BS_34AF89ACE I 0.863
Traes_4AL_F3571097B Triticum aestivum Traes_4AL_F3571097B I 0.863
Lus10011578.g Linum usitatissimum Lus10011578.g I 0.863
F775_11371 Aegilops tauschii F775_11371 I 0.863
BRADI1G10170 Brachypodium distachyon BRADI1G10170 I 0.863
Bostr.25542s0234 Boechera stricta Bostr.25542s0234 I 0.856
Ca_02264 Cicer arietinum Ca_02264 I 0.851
GLYMA01G40620 Glycine max GLYMA01G40620 I 0.851
MTR_5g014520 Medicago truncatula MTR_5g014520 I 0.851
Ciclev10027158m.g Citrus clementina Ciclev10027158m.g I 0.845
orange1.1g037441m.g Citrus sinensis orange1.1g037441m.g I 0.845
GLYMA11G04690 Glycine max GLYMA11G04690 I 0.845
MDP0000318216 Malus domestica MDP0000318216 I 0.845
PDK_20s1524891g002 Phoenix dactylifera PDK_20s1524891g002 I 0.844
SapurV1A.3034s0010 Salix purpurea SapurV1A.3034s0010 I 0.843
Cagra.5392s0006 Capsella grandiflora Cagra.5392s0006 I 0.843
Carubv10025041m.g Capsella rubella Carubv10025041m.g I 0.843
Ciclev10027504m.g Citrus clementina Ciclev10027504m.g I 0.843
cassava35671.valid.m1 Manihot esculenta cassava35671.valid.m1 I 0.843
Ciclev10028925m.g Citrus clementina Ciclev10028925m.g I 0.843
cassava18197.valid.m1 Manihot esculenta cassava18197.valid.m1 I 0.843
cassava37087.valid.m1 Manihot esculenta cassava37087.valid.m1 I 0.843
Thhalv10000426m.g Eutrema salsugineum Thhalv10000426m.g I 0.843
PDK_20s1394471g002 Phoenix dactylifera PDK_20s1394471g002 I 0.843
Aquca_010_00012 Aquilegia coerulea Aquca_010_00012 I 0.843
Eucgr.I00634 Eucalyptus grandis Eucgr.I00634 I 0.843
cassava20178.m1 Manihot esculenta cassava20178.m1 I 0.843
PK09122.1 Cannabis sativa PK09122.1 I 0.843
PK11573.1 Cannabis sativa PK11573.1 I 0.843
Cucsa.218800 Cucumis sativus Cucsa.218800 I 0.843
evm.TU.supercontig_20.63 Carica papaya evm.TU.supercontig_20.63 I 0.843
MDP0000174149 Malus domestica MDP0000174149 I 0.843
MDP0000170202 Malus domestica MDP0000170202 I 0.843
MDP0000159571 Malus domestica MDP0000159571 I 0.843
Lus10039639.g Linum usitatissimum Lus10039639.g I 0.843
MDP0000291132 Malus domestica MDP0000291132 I 0.843
SapurV1A.0019s0910 Salix purpurea SapurV1A.0019s0910 I 0.843
Pavir.J01849 Panicum virgatum Pavir.J01849 I 0.843
orange1.1g026436m.g Citrus sinensis orange1.1g026436m.g I 0.843
orange1.1g021208m.g Citrus sinensis orange1.1g021208m.g I 0.843
MDP0000502440 Malus domestica MDP0000502440 I 0.843
cassava16019.m1 Manihot esculenta cassava16019.m1 I 0.843
Lus10003488.g Linum usitatissimum Lus10003488.g I 0.843
gene05612-v1.0-hybrid Fragaria vesca gene05612-v1.0-hybrid I 0.843
gene05610-v1.0-hybrid Fragaria vesca gene05610-v1.0-hybrid I 0.843
Pavir.J35103 Panicum virgatum Pavir.J35103 I 0.843
evm.TU.supercontig_129.37 Carica papaya evm.TU.supercontig_129.37 I 0.843
Gorai.002G211500 Gossypium raimondii Gorai.002G211500 I 0.843
SapurV1A.0279s0180 Salix purpurea SapurV1A.0279s0180 I 0.843
Gorai.007G229000 Gossypium raimondii Gorai.007G229000 I 0.843
Gorai.007G228900 Gossypium raimondii Gorai.007G228900 I 0.843
Gorai.003G034700 Gossypium raimondii Gorai.003G034700 I 0.843
Gorai.003G034600 Gossypium raimondii Gorai.003G034600 I 0.843
Eucgr.I02518 Eucalyptus grandis Eucgr.I02518 I 0.843
28179.m000478 Ricinus communis 28179.m000478 I 0.843
ORGLA03G0295100 Oryza glaberrima ORGLA03G0295100 I 0.843
ORUFI03G33950 Oryza rufipogon ORUFI03G33950 I 0.843
OPUNC03G29750 Oryza punctata OPUNC03G29750 I 0.843
ONIVA03G34090 Oryza nivara ONIVA03G34090 I 0.843
OMERI03G29350 Oryza meridionalis OMERI03G29350 I 0.843
OS03G0725800 Oryza sativa OS03G0725800 I 0.843
PGSC0003DMG400005101 Solanum tuberosum PGSC0003DMG400005101 I 0.843
PRUPE_ppa008130mg Prunus persica PRUPE_ppa008130mg I 0.843
PRUPE_ppa017640mg Prunus persica PRUPE_ppa017640mg I 0.843
POPTR_0009s08500 Populus trichocarpa POPTR_0009s08500 I 0.843
29804.m001498 Ricinus communis 29804.m001498 I 0.843
POPTR_0001s29400 Populus trichocarpa POPTR_0001s29400 I 0.843
OGLUM03G32210 Oryza glumaepatula OGLUM03G32210 I 0.843
OBART03G32580 Oryza barthii OBART03G32580 I 0.843
Bra030210 Brassica rapa Bra030210 I 0.843
Bra039924 Brassica rapa Bra039924 I 0.843
Bo4g150960 Brassica oleracea Bo4g150960 I 0.843
BGIOSGA013493 Oryza indica BGIOSGA013493 I 0.843
AT2G22750 Arabidopsis thaliana AT2G22750 D 0.843
fgenesh2_kg.4__196__AT2G22750.1 Arabidopsis lyrata fgenesh2_kg.4__196__AT2G22750.1 I 0.843
GLYMA07G30420 Glycine max GLYMA07G30420 I 0.843
GSMUA_AchrUn_randomG15440_001 Musa acuminata GSMUA_AchrUn_randomG15440_001 I 0.843
LPERR03G27220 Leersia perrieri LPERR03G27220 I 0.843
GSMUA_Achr2G08590_001 Musa acuminata GSMUA_Achr2G08590_001 I 0.843
GRMZM2G082343 Zea mays GRMZM2G082343 I 0.843
GRMZM2G019806 Zea mays GRMZM2G019806 I 0.843
Sb01g009590 Sorghum bicolor Sb01g009590 I 0.843
POPTR_0005s09810 Populus trichocarpa POPTR_0005s09810 I 0.843
VIT_03s0088g01240 Vitis vinifera VIT_03s0088g01240 I 0.843
VIT_00s0927g00010 Vitis vinifera VIT_00s0927g00010 I 0.843
TCM_000895 Theobroma cacao TCM_000895 I 0.843
TCM_000894 Theobroma cacao TCM_000894 I 0.843
VIT_07s0205g00160 Vitis vinifera VIT_07s0205g00160 I 0.843
Cla000123 Citrullus lanatus Cla000123 I 0.843
28179.m000479 Ricinus communis 28179.m000479 I 0.843
AMTR_s00033p00078670 Amborella trichopoda AMTR_s00033p00078670 I 0.843
Pm021008 Prunus mume Pm021008 I 0.843
Pm002305 Prunus mume Pm002305 I 0.843
Solyc01g106460.2 Solanum lycopersicum Solyc01g106460.2 I 0.843
VIT_00s0824g00020 Vitis vinifera VIT_00s0824g00020 I 0.843
SELMODRAFT_48361 Selaginella moellendorffii SELMODRAFT_48361 I 0.843
Si036393m.g Setaria italica Si036393m.g I 0.843
SELMODRAFT_34848 Selaginella moellendorffii SELMODRAFT_34848 I 0.843
fgenesh1_pg.scaffold_4000056 Physcomitrella patens fgenesh1_pg.scaffold_4000056 N 0.842
e_gw1.130.107.1 Physcomitrella patens e_gw1.130.107.1 N 0.842
fgenesh1_pg.scaffold_57000137 Physcomitrella patens fgenesh1_pg.scaffold_57000137 N 0.842
fgenesh2_pg.scaffold_77000085 Physcomitrella patens fgenesh2_pg.scaffold_77000085 N 0.842
GSMUA_Achr4G23070_001 Musa acuminata GSMUA_Achr4G23070_001 I 0.841
Bo1g017100 Brassica oleracea Bo1g017100 N 0.841
Sb08g020320 Sorghum bicolor Sb08g020320 N 0.840
OPUNC12G16280 Oryza punctata OPUNC12G16280 N 0.840
Sb08g020300 Sorghum bicolor Sb08g020300 N 0.840
gene07355-v1.0-hybrid Fragaria vesca gene07355-v1.0-hybrid I 0.840
Eucgr.H02389 Eucalyptus grandis Eucgr.H02389 I 0.840
LjT17L12.80.nd Lotus japonicus LjT17L12.80.nd I 0.840
Lus10012457.g Linum usitatissimum Lus10012457.g I 0.840
Gorai.008G087600 Gossypium raimondii Gorai.008G087600 I 0.840
Eucgr.H02390 Eucalyptus grandis Eucgr.H02390 I 0.840
Si024602m.g Setaria italica Si024602m.g N 0.840
Lus10020503.g Linum usitatissimum Lus10020503.g I 0.840
TCM_006357 Theobroma cacao TCM_006357 I 0.840
Sb08g020290 Sorghum bicolor Sb08g020290 N 0.840
GRMZM2G165090 Zea mays GRMZM2G165090 N 0.840
chr2.CM0021.410.nc Lotus japonicus chr2.CM0021.410.nc I 0.839
chr3.LjT47G05.50.nc Lotus japonicus chr3.LjT47G05.50.nc I 0.839
chr5.CM0158.350.nd Lotus japonicus chr5.CM0158.350.nd I 0.839