Bo9g004020 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo9g004020 T031295_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g004020.1 bHLH 108 159

Links

Other bHLH family TFs
Other Brassica oleracea TFs

219 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30076.m004456 Ricinus communis 30076.m004456 N 0.866
AC233899.1_FG002 Zea mays AC233899.1_FG002 N 0.883
AMTR_s00001p00272070 Amborella trichopoda AMTR_s00001p00272070 N 0.860
BGIOSGA005582 Oryza indica BGIOSGA005582 N 0.883
BGIOSGA008846 Oryza indica BGIOSGA008846 N 0.853
BGIOSGA012015 Oryza indica BGIOSGA012015 N 0.853
BGIOSGA017025 Oryza indica BGIOSGA017025 N 0.853
BGIOSGA017471 Oryza indica BGIOSGA017471 N 0.853
BGIOSGA030936 Oryza indica BGIOSGA030936 N 0.859
BGIOSGA032814 Oryza indica BGIOSGA032814 N 0.883
bHLH071 Arabidopsis lyrata fgenesh2_kg.8__126__AT5G46690.1 N 0.851
bHLH071 Vitis vinifera VIT_02s0012g01450 N 0.856
BHLH57 Arabidopsis thaliana AT4G01460 N 0.914
BHLH67 Arabidopsis thaliana AT3G61950 N 0.872
BHLH71 Arabidopsis thaliana AT5G46690 N 0.851
BHLH96 Arabidopsis thaliana AT1G72210 N 0.859
Bo2g075510 Brassica oleracea Bo2g075510 N 0.839
Bo4g006950 Brassica oleracea Bo4g006950 N 0.861
Bo6g092570 Brassica oleracea Bo6g092570 N 0.859
Bo7g075600 Brassica oleracea Bo7g075600 N 0.851
Bo8g097470 Brassica oleracea Bo8g097470 N 0.872
Bo9g055890 Brassica oleracea Bo9g055890 N 0.840
Bo9g065460 Brassica oleracea Bo9g065460 N 0.851
Bostr.10273s0131 Boechera stricta Bostr.10273s0131 N 0.859
Bostr.13158s0200 Boechera stricta Bostr.13158s0200 N 0.872
Bostr.25993s0085 Boechera stricta Bostr.25993s0085 N 0.864
Bostr.28243s0066 Boechera stricta Bostr.28243s0066 N 0.851
Bostr.7365s0007 Boechera stricta Bostr.7365s0007 N 0.914
Bra003886 Brassica rapa Bra003886 N 0.859
Bra007644 Brassica rapa Bra007644 N 0.872
Bra008017 Brassica rapa Bra008017 N 0.839
Bra016080 Brassica rapa Bra016080 N 0.859
Bra017533 Brassica rapa Bra017533 N 0.851
Bra025007 Brassica rapa Bra025007 N 0.851
Bra027958 Brassica rapa Bra027958 N 0.840
Bra037414 Brassica rapa Bra037414 N 0.914
BRADI1G71990 Brachypodium distachyon BRADI1G71990 N 0.863
BRADI3G38510 Brachypodium distachyon BRADI3G38510 N 0.863
BRADI3G52150 Brachypodium distachyon BRADI3G52150 N 0.853
BRADI3G58360 Brachypodium distachyon BRADI3G58360 N 0.863
BRADI4G32650 Brachypodium distachyon BRADI4G32650 N 0.867
BRADI5G19950 Brachypodium distachyon BRADI5G19950 N 0.853
Cagra.0483s0048 Capsella grandiflora Cagra.0483s0048 N 0.872
Cagra.0751s0031 Capsella grandiflora Cagra.0751s0031 N 0.851
Cagra.10175s0007 Capsella grandiflora Cagra.10175s0007 N 0.884
Cagra.4006s0007 Capsella grandiflora Cagra.4006s0007 N 0.859
Carubv10001470m.g Capsella rubella Carubv10001470m.g N 0.884
Carubv10018614m.g Capsella rubella Carubv10018614m.g N 0.872
Carubv10020657m.g Capsella rubella Carubv10020657m.g N 0.859
Carubv10026748m.g Capsella rubella Carubv10026748m.g N 0.851
cassava29786.valid.m1 Manihot esculenta cassava29786.valid.m1 N 0.866
cassava31098.valid.m1 Manihot esculenta cassava31098.valid.m1 N 0.859
cassava34492.m1 Manihot esculenta cassava34492.m1 N 0.839
cassava35271.valid.m1 Manihot esculenta cassava35271.valid.m1 N 0.859
Ca_22410 Cicer arietinum Ca_22410 N 0.866
Ca_28086 Cicer arietinum Ca_28086 N 0.847
chr1.LjT16B05.110.nd Lotus japonicus chr1.LjT16B05.110.nd N 0.859
chr3.CM0208.290.nc Lotus japonicus chr3.CM0208.290.nc N 0.866
Ciclev10001811m.g Citrus clementina Ciclev10001811m.g N 0.859
Ciclev10020360m.g Citrus clementina Ciclev10020360m.g N 0.866
Ciclev10026131m.g Citrus clementina Ciclev10026131m.g N 0.839
Eucgr.B00048 Eucalyptus grandis Eucgr.B00048 N 0.859
Eucgr.H04738 Eucalyptus grandis Eucgr.H04738 N 0.839
evm.TU.supercontig_36.191 Carica papaya evm.TU.supercontig_36.191 N 0.859
evm.TU.supercontig_55.64 Carica papaya evm.TU.supercontig_55.64 N 0.881
evm.TU.supercontig_57.85 Carica papaya evm.TU.supercontig_57.85 N 0.866
e_gw1.519.9.1 Physcomitrella patens e_gw1.519.9.1 N 0.847
F775_11253 Aegilops tauschii F775_11253 N 0.853
fgenesh1_pm.C_scaffold_6002861 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002861 N 0.862
fgenesh2_kg.5__2692__AT3G61950.1 Arabidopsis lyrata fgenesh2_kg.5__2692__AT3G61950.1 N 0.872
gene18608-v1.0-hybrid Fragaria vesca gene18608-v1.0-hybrid N 0.866
gene18888-v1.0-hybrid Fragaria vesca gene18888-v1.0-hybrid N 0.842
GLYMA02G37313 Glycine max GLYMA02G37313 N 0.859
GLYMA07G05500 Glycine max GLYMA07G05500 N 0.866
GLYMA14G35560 Glycine max GLYMA14G35560 N 0.859
GLYMA16G02020 Glycine max GLYMA16G02020 N 0.866
Gorai.005G094800 Gossypium raimondii Gorai.005G094800 N 0.839
Gorai.007G113200 Gossypium raimondii Gorai.007G113200 N 0.863
Gorai.007G113300 Gossypium raimondii Gorai.007G113300 N 0.863
Gorai.007G294800 Gossypium raimondii Gorai.007G294800 N 0.853
Gorai.013G204300 Gossypium raimondii Gorai.013G204300 N 0.839
GRMZM2G006631 Zea mays GRMZM2G006631 N 0.883
GRMZM2G008691 Zea mays GRMZM2G008691 N 0.881
GRMZM2G015666 Zea mays GRMZM2G015666 N 0.862
GRMZM2G045883 Zea mays GRMZM2G045883 N 0.883
GRMZM2G082586 Zea mays GRMZM2G082586 N 0.859
GRMZM2G086474 Zea mays GRMZM2G086474 N 0.840
GRMZM2G091003 Zea mays GRMZM2G091003 N 0.853
GRMZM2G111146 Zea mays GRMZM2G111146 N 0.853
GRMZM2G162450 Zea mays GRMZM2G162450 N 0.853
GSMUA_Achr10G19180_001 Musa acuminata GSMUA_Achr10G19180_001 N 0.881
GSMUA_Achr11G00350_001 Musa acuminata GSMUA_Achr11G00350_001 N 0.856
GSMUA_Achr11G23340_001 Musa acuminata GSMUA_Achr11G23340_001 N 0.856
GSMUA_Achr2G06030_001 Musa acuminata GSMUA_Achr2G06030_001 N 0.856
GSMUA_Achr2G22310_001 Musa acuminata GSMUA_Achr2G22310_001 N 0.853
GSMUA_Achr6G10290_001 Musa acuminata GSMUA_Achr6G10290_001 N 0.853
GSMUA_Achr8G17650_001 Musa acuminata GSMUA_Achr8G17650_001 N 0.859
GSMUA_Achr8G28400_001 Musa acuminata GSMUA_Achr8G28400_001 N 0.856
LPERR02G23260 Leersia perrieri LPERR02G23260 N 0.853
LPERR02G27220 Leersia perrieri LPERR02G27220 N 0.863
LPERR03G05820 Leersia perrieri LPERR03G05820 N 0.853
LPERR04G19210 Leersia perrieri LPERR04G19210 N 0.853
LPERR09G09700 Leersia perrieri LPERR09G09700 N 0.839
LPERR10G05620 Leersia perrieri LPERR10G05620 N 0.863
Lus10010101.g Linum usitatissimum Lus10010101.g N 0.886
Lus10012603.g Linum usitatissimum Lus10012603.g N 0.886
Lus10015902.g Linum usitatissimum Lus10015902.g N 0.839
MLOC_10595 Hordeum vulgare MLOC_10595 N 0.853
MLOC_21759 Hordeum vulgare MLOC_21759 N 0.859
MLOC_45114 Hordeum vulgare MLOC_45114 N 0.853
MLOC_67091 Hordeum vulgare MLOC_67091 N 0.853
MLOC_67417 Hordeum vulgare MLOC_67417 N 0.853
OB02G35790 Oryza brachyantha OB02G35790 N 0.853
OB02G40170 Oryza brachyantha OB02G40170 N 0.883
OB03G16590 Oryza brachyantha OB03G16590 N 0.883
OB04G30380 Oryza brachyantha OB04G30380 N 0.853
OB05G34990 Oryza brachyantha OB05G34990 N 0.853
OB09G19960 Oryza brachyantha OB09G19960 N 0.859
OB10G16200 Oryza brachyantha OB10G16200 N 0.883
OBART02G28630 Oryza barthii OBART02G28630 N 0.853
OBART02G33270 Oryza barthii OBART02G33270 N 0.883
OBART03G06470 Oryza barthii OBART03G06470 N 0.853
OBART04G23490 Oryza barthii OBART04G23490 N 0.853
OBART05G27490 Oryza barthii OBART05G27490 N 0.853
OBART10G08120 Oryza barthii OBART10G08120 N 0.883
OGLUM02G33770 Oryza glumaepatula OGLUM02G33770 N 0.883
OGLUM03G06480 Oryza glumaepatula OGLUM03G06480 N 0.853
OGLUM04G23410 Oryza glumaepatula OGLUM04G23410 N 0.853
OGLUM05G29000 Oryza glumaepatula OGLUM05G29000 N 0.853
OGLUM10G07850 Oryza glumaepatula OGLUM10G07850 N 0.883
OLONG_001045 Oryza longistaminata OLONG_001045 N 0.853
OLONG_028191 Oryza longistaminata OLONG_028191 N 0.853
OMERI02G31750 Oryza meridionalis OMERI02G31750 N 0.883
OMERI03G01350 Oryza meridionalis OMERI03G01350 N 0.853
OMERI03G06350 Oryza meridionalis OMERI03G06350 N 0.853
OMERI05G23490 Oryza meridionalis OMERI05G23490 N 0.853
OMERI09G10430 Oryza meridionalis OMERI09G10430 N 0.859
ONIVA02G06380 Oryza nivara ONIVA02G06380 N 0.853
ONIVA02G35790 Oryza nivara ONIVA02G35790 N 0.883
ONIVA04G03690 Oryza nivara ONIVA04G03690 N 0.853
ONIVA04G22720 Oryza nivara ONIVA04G22720 N 0.853
ONIVA05G29540 Oryza nivara ONIVA05G29540 N 0.853
ONIVA09G13890 Oryza nivara ONIVA09G13890 N 0.859
ONIVA10G07810 Oryza nivara ONIVA10G07810 N 0.883
OPUNC02G26270 Oryza punctata OPUNC02G26270 N 0.853
OPUNC02G30580 Oryza punctata OPUNC02G30580 N 0.883
OPUNC03G06240 Oryza punctata OPUNC03G06240 N 0.883
OPUNC04G21010 Oryza punctata OPUNC04G21010 N 0.853
OPUNC05G25080 Oryza punctata OPUNC05G25080 N 0.853
OPUNC09G11790 Oryza punctata OPUNC09G11790 N 0.859
OPUNC10G07050 Oryza punctata OPUNC10G07050 N 0.883
orange1.1g013752m.g Citrus sinensis orange1.1g013752m.g N 0.866
orange1.1g020210m.g Citrus sinensis orange1.1g020210m.g N 0.859
orange1.1g043618m.g Citrus sinensis orange1.1g043618m.g N 0.839
ORGLA02G0246400 Oryza glaberrima ORGLA02G0246400 N 0.853
ORGLA02G0287300 Oryza glaberrima ORGLA02G0287300 N 0.883
ORGLA03G0062600 Oryza glaberrima ORGLA03G0062600 N 0.853
ORGLA04G0200200 Oryza glaberrima ORGLA04G0200200 N 0.853
ORGLA05G0238800 Oryza glaberrima ORGLA05G0238800 N 0.853
ORGLA09G0101900 Oryza glaberrima ORGLA09G0101900 N 0.859
ORGLA10G0067600 Oryza glaberrima ORGLA10G0067600 N 0.883
ORUFI02G30170 Oryza rufipogon ORUFI02G30170 N 0.853
ORUFI02G34810 Oryza rufipogon ORUFI02G34810 N 0.883
ORUFI03G06370 Oryza rufipogon ORUFI03G06370 N 0.853
ORUFI04G25160 Oryza rufipogon ORUFI04G25160 N 0.853
ORUFI05G29450 Oryza rufipogon ORUFI05G29450 N 0.853
ORUFI09G14410 Oryza rufipogon ORUFI09G14410 N 0.859
ORUFI10G08570 Oryza rufipogon ORUFI10G08570 N 0.883
OS02G0691500 Oryza sativa OS02G0691500 N 0.853
OS03G0188400 Oryza sativa OS03G0188400 N 0.853
OS05G0586300 Oryza sativa OS05G0586300 N 0.853
OS09G0468700 Oryza sativa OS09G0468700 N 0.859
OS10G0376900 Oryza sativa OS10G0376900 N 0.883
Pavir.Aa00538 Panicum virgatum Pavir.Aa00538 N 0.883
Pavir.Ab02502 Panicum virgatum Pavir.Ab02502 N 0.853
Pavir.Bb02386 Panicum virgatum Pavir.Bb02386 N 0.859
Pavir.Db01842 Panicum virgatum Pavir.Db01842 N 0.886
Pavir.Ga00771 Panicum virgatum Pavir.Ga00771 N 0.840
Pavir.Ia02758 Panicum virgatum Pavir.Ia02758 N 0.883
Pavir.Ia03109 Panicum virgatum Pavir.Ia03109 N 0.883
Pavir.Ia04907 Panicum virgatum Pavir.Ia04907 N 0.883
Pavir.Ib02778 Panicum virgatum Pavir.Ib02778 N 0.883
Pavir.J03740 Panicum virgatum Pavir.J03740 N 0.853
Pavir.J04021 Panicum virgatum Pavir.J04021 N 0.853
Pavir.J15346 Panicum virgatum Pavir.J15346 N 0.840
Pavir.J22933 Panicum virgatum Pavir.J22933 N 0.859
Pavir.J40759 Panicum virgatum Pavir.J40759 N 0.883
PGSC0003DMG400016145 Solanum tuberosum PGSC0003DMG400016145 N 0.863
POPTR_0002s10230 Populus trichocarpa POPTR_0002s10230 N 0.859
SapurV1A.0613s0120 Salix purpurea SapurV1A.0613s0120 N 0.859
Sb0012s004780 Sorghum bicolor Sb0012s004780 N 0.883
Sb01g044640 Sorghum bicolor Sb01g044640 N 0.883
Sb02g027210 Sorghum bicolor Sb02g027210 N 0.859
Sb04g027280 Sorghum bicolor Sb04g027280 N 0.883
Sb04g031250 Sorghum bicolor Sb04g031250 N 0.853
Sb09g030060 Sorghum bicolor Sb09g030060 N 0.853
scaffold_403653.1 Arabidopsis lyrata scaffold_403653.1 N 0.864
Si007984m.g Setaria italica Si007984m.g N 0.852
Si010485m.g Setaria italica Si010485m.g N 0.840
Si017701m.g Setaria italica Si017701m.g N 0.883
Si017715m.g Setaria italica Si017715m.g N 0.853
Si021834m.g Setaria italica Si021834m.g N 0.853
Si036568m.g Setaria italica Si036568m.g N 0.883
Si038653m.g Setaria italica Si038653m.g N 0.883
Solyc11g010340.1 Solanum lycopersicum Solyc11g010340.1 N 0.863
TCM_005028 Theobroma cacao TCM_005028 N 0.863
TCM_034439 Theobroma cacao TCM_034439 N 0.859
Thhalv10000961m.g Eutrema salsugineum Thhalv10000961m.g N 0.851
Thhalv10006045m.g Eutrema salsugineum Thhalv10006045m.g N 0.872
Thhalv10018867m.g Eutrema salsugineum Thhalv10018867m.g N 0.859
Thhalv10028815m.g Eutrema salsugineum Thhalv10028815m.g N 0.914
Traes_2BL_E58521BDF Triticum aestivum Traes_2BL_E58521BDF N 0.853
Traes_4AL_EE88645E2 Triticum aestivum Traes_4AL_EE88645E2 N 0.853
Traes_4BL_A48C29364 Triticum aestivum Traes_4BL_A48C29364 N 0.853
Traes_4DL_A76BE77E4 Triticum aestivum Traes_4DL_A76BE77E4 N 0.853
Traes_5BL_DA72CE20D Triticum aestivum Traes_5BL_DA72CE20D N 0.859
Traes_6DL_882BC1812 Triticum aestivum Traes_6DL_882BC1812 N 0.853
VIT_07s0191g00240 Vitis vinifera VIT_07s0191g00240 N 0.856
VIT_18s0001g06650 Vitis vinifera VIT_18s0001g06650 N 0.859