Bra015960 (Brassica rapa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bra015960 T031438_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra015960.1-P bHLH 155 205

Links

Other bHLH family TFs
Other Brassica rapa TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra008113 Brassica rapa Bra008113 N 0.914
Cagra.0909s0019 Capsella grandiflora Cagra.0909s0019 N 0.914
fgenesh1_pm.C_scaffold_1001571 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001571 N 0.914
Bostr.7128s0442 Boechera stricta Bostr.7128s0442 N 0.914
Bo6g118140 Brassica oleracea Bo6g118140 N 0.914
Carubv10009894m.g Capsella rubella Carubv10009894m.g N 0.914
Thhalv10019010m.g Eutrema salsugineum Thhalv10019010m.g N 0.914
BEE1 Arabidopsis thaliana AT1G18400 N 0.914
Bo2g080780 Brassica oleracea Bo2g080780 N 0.914
Cagra.0876s0016 Capsella grandiflora Cagra.0876s0016 N 0.902
Carubv10020802m.g Capsella rubella Carubv10020802m.g N 0.902
Bostr.3288s0027 Boechera stricta Bostr.3288s0027 N 0.902
BEE3 Arabidopsis lyrata fgenesh2_kg.2__1650__AT1G73830.1 N 0.902
Bo5g025360 Brassica oleracea Bo5g025360 N 0.902
BEE3 Arabidopsis thaliana AT1G73830 N 0.902
Bra025910 Brassica rapa Bra025910 N 0.902
Thhalv10008517m.g Eutrema salsugineum Thhalv10008517m.g N 0.902
mgf013353m Mimulus guttatus mgf013353m I 0.875
29974.m000242 Ricinus communis 29974.m000242 I 0.875
Cucsa.111110 Cucumis sativus Cucsa.111110 I 0.875
Eucgr.B00731 Eucalyptus grandis Eucgr.B00731 I 0.875
MDP0000879337 Malus domestica MDP0000879337 I 0.875
SapurV1A.0530s0010 Salix purpurea SapurV1A.0530s0010 I 0.875
SapurV1A.0719s0010 Salix purpurea SapurV1A.0719s0010 I 0.875
SapurV1A.1621s0020 Salix purpurea SapurV1A.1621s0020 I 0.875
Pm025178 Prunus mume Pm025178 I 0.875
Gorai.007G005700 Gossypium raimondii Gorai.007G005700 I 0.875
Gorai.001G074900 Gossypium raimondii Gorai.001G074900 I 0.875
Gorai.006G060400 Gossypium raimondii Gorai.006G060400 I 0.875
Gorai.006G194500 Gossypium raimondii Gorai.006G194500 I 0.875
evm.TU.supercontig_3.503 Carica papaya evm.TU.supercontig_3.503 N 0.875
Cla019256 Citrullus lanatus Cla019256 I 0.875
Solyc03g119390.2 Solanum lycopersicum Solyc03g119390.2 N 0.875
Solyc12g036470.1 Solanum lycopersicum Solyc12g036470.1 I 0.875
POPTR_0015s03760 Populus trichocarpa POPTR_0015s03760 I 0.875
POPTR_0012s05210 Populus trichocarpa POPTR_0012s05210 I 0.875
PGSC0003DMG400005388 Solanum tuberosum PGSC0003DMG400005388 I 0.875
PGSC0003DMG400005725 Solanum tuberosum PGSC0003DMG400005725 N 0.875
TCM_012362 Theobroma cacao TCM_012362 I 0.875
PRUPE_ppa015301mg Prunus persica PRUPE_ppa015301mg I 0.875
VIT_17s0000g03580 Vitis vinifera VIT_17s0000g03580 I 0.875
Cla018783 Citrullus lanatus Cla018783 I 0.875
GLYMA08G04661 Glycine max GLYMA08G04661 N 0.872
GLYMA09G31580 Glycine max GLYMA09G31580 I 0.872
Lus10009673.g Linum usitatissimum Lus10009673.g I 0.872
GLYMA05G35060 Glycine max GLYMA05G35060 N 0.872
GLYMA07G10311 Glycine max GLYMA07G10311 I 0.872
chr4.CM0042.750.nc Lotus japonicus chr4.CM0042.750.nc N 0.872
Ca_13025 Cicer arietinum Ca_13025 I 0.872
Lus10009034.g Linum usitatissimum Lus10009034.g I 0.872
gene25151-v1.0-hybrid Fragaria vesca gene25151-v1.0-hybrid I 0.863
cassava32072.m1 Manihot esculenta cassava32072.m1 N 0.860
GSMUA_Achr5G23700_001 Musa acuminata GSMUA_Achr5G23700_001 I 0.852
Eucgr.K02229 Eucalyptus grandis Eucgr.K02229 I 0.851
mgf017044m Mimulus guttatus mgf017044m I 0.851
Aquca_041_00009 Aquilegia coerulea Aquca_041_00009 I 0.848
MTR_6g084120 Medicago truncatula MTR_6g084120 N 0.848
MDP0000779358 Malus domestica MDP0000779358 N 0.847
BHLH75 Arabidopsis thaliana AT1G25330 I 0.842
GSMUA_Achr9G00560_001 Musa acuminata GSMUA_Achr9G00560_001 I 0.839
Eucgr.H00748 Eucalyptus grandis Eucgr.H00748 I 0.839
GSMUA_Achr4G16120_001 Musa acuminata GSMUA_Achr4G16120_001 I 0.839
AMTR_s00079p00137860 Amborella trichopoda AMTR_s00079p00137860 I 0.839
GSMUA_Achr1G21010_001 Musa acuminata GSMUA_Achr1G21010_001 I 0.839