Bra023939 (Brassica rapa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bra023939 T031485_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra023939.1-P bHLH 328 365

Links

Other bHLH family TFs
Other Brassica rapa TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo1g108780 Brassica oleracea Bo1g108780 N 0.914
Bo1g108770 Brassica oleracea Bo1g108770 N 0.914
29634.m002080 Ricinus communis 29634.m002080 N 0.868
Bostr.19424s0583 Boechera stricta Bostr.19424s0583 N 0.861
Cagra.0316s0001 Capsella grandiflora Cagra.0316s0001 N 0.861
mgf001258m Mimulus guttatus mgf001258m N 0.861
Cucsa.059580 Cucumis sativus Cucsa.059580 N 0.861
cassava28105.m1 Manihot esculenta cassava28105.m1 N 0.861
cassava36956.valid.m1 Manihot esculenta cassava36956.valid.m1 N 0.861
Carubv10013632m.g Capsella rubella Carubv10013632m.g N 0.861
Ciclev10008228m.g Citrus clementina Ciclev10008228m.g N 0.861
Gorai.009G429100 Gossypium raimondii Gorai.009G429100 N 0.861
MTR_8g466800 Medicago truncatula MTR_8g466800 N 0.861
Gorai.002G079200 Gossypium raimondii Gorai.002G079200 N 0.861
evm.TU.supercontig_12.1 Carica papaya evm.TU.supercontig_12.1 N 0.861
Eucgr.F03384 Eucalyptus grandis Eucgr.F03384 N 0.861
PGSC0003DMG400005064 Solanum tuberosum PGSC0003DMG400005064 N 0.861
PGSC0003DMG400019236 Solanum tuberosum PGSC0003DMG400019236 N 0.861
Ca_06936 Cicer arietinum Ca_06936 N 0.861
Ca_19891 Cicer arietinum Ca_19891 N 0.861
TCM_031172 Theobroma cacao TCM_031172 N 0.861
Solyc10g006640.2 Solanum lycopersicum Solyc10g006640.2 N 0.861
BHLH123 Arabidopsis thaliana AT3G20640 N 0.861
VIT_19s0014g04670 Vitis vinifera VIT_19s0014g04670 N 0.861
PRUPE_ppa023041mg Prunus persica PRUPE_ppa023041mg N 0.861
Cla003883 Citrullus lanatus Cla003883 N 0.861
MTR_2g081820 Medicago truncatula MTR_2g081820 N 0.861
PGSC0003DMG400025020 Solanum tuberosum PGSC0003DMG400025020 N 0.861
27733.m000033 Ricinus communis 27733.m000033 N 0.861
Pm011692 Prunus mume Pm011692 N 0.861
POPTR_0011s13320 Populus trichocarpa POPTR_0011s13320 N 0.861
Solyc07g063830.2 Solanum lycopersicum Solyc07g063830.2 N 0.861
gene03259-v1.0-hybrid Fragaria vesca gene03259-v1.0-hybrid N 0.861
Thhalv10020666m.g Eutrema salsugineum Thhalv10020666m.g N 0.861
Bra001798 Brassica rapa Bra001798 N 0.861
Bo3g076150 Brassica oleracea Bo3g076150 N 0.861
MDP0000296508 Malus domestica MDP0000296508 N 0.861
SapurV1A.0694s0030 Salix purpurea SapurV1A.0694s0030 N 0.861
GLYMA06G40760 Glycine max GLYMA06G40760 N 0.861
GLYMA13G36010 Glycine max GLYMA13G36010 N 0.861
GLYMA12G34490 Glycine max GLYMA12G34490 N 0.861
GLYMA12G17630 Glycine max GLYMA12G17630 N 0.861
MDP0000295440 Malus domestica MDP0000295440 N 0.861
Bo01052s010 Brassica oleracea Bo01052s010 N 0.861
Lus10038550.g Linum usitatissimum Lus10038550.g N 0.861
PK22680.1 Cannabis sativa PK22680.1 N 0.861
Traes_2BL_E82F7902D Triticum aestivum Traes_2BL_E82F7902D N 0.860
LjSGA_014369.1 Lotus japonicus LjSGA_014369.1 N 0.860
SapurV1A.0441s0120 Salix purpurea SapurV1A.0441s0120 N 0.860
29842.m003704 Ricinus communis 29842.m003704 N 0.860
PDK_20s1457351g001 Phoenix dactylifera PDK_20s1457351g001 N 0.860
Pm009855 Prunus mume Pm009855 N 0.860
SapurV1A.1304s0050 Salix purpurea SapurV1A.1304s0050 N 0.860
SapurV1A.0028s0510 Salix purpurea SapurV1A.0028s0510 N 0.860
VIT_04s0023g02410 Vitis vinifera VIT_04s0023g02410 N 0.860
Ca_00214 Cicer arietinum Ca_00214 N 0.860
VIT_00s0274g00070 Vitis vinifera VIT_00s0274g00070 N 0.860
PK14284.1 Cannabis sativa PK14284.1 N 0.860
TRIUR3_00968 Triticum urartu TRIUR3_00968 N 0.860
Traes_2DL_DCD7B13A8 Triticum aestivum Traes_2DL_DCD7B13A8 N 0.860
Pavir.J25904 Panicum virgatum Pavir.J25904 N 0.860
Traes_2BL_A014BCC51 Triticum aestivum Traes_2BL_A014BCC51 N 0.860
gene30665-v1.0-hybrid Fragaria vesca gene30665-v1.0-hybrid N 0.860
evm.TU.supercontig_27.162 Carica papaya evm.TU.supercontig_27.162 N 0.860
Eucgr.E03614 Eucalyptus grandis Eucgr.E03614 N 0.860
Ciclev10015039m.g Citrus clementina Ciclev10015039m.g N 0.860
Gorai.006G085000 Gossypium raimondii Gorai.006G085000 N 0.860
Gorai.009G175300 Gossypium raimondii Gorai.009G175300 N 0.860
Lus10007613.g Linum usitatissimum Lus10007613.g N 0.860
Lus10018400.g Linum usitatissimum Lus10018400.g N 0.860
Gorai.010G147100 Gossypium raimondii Gorai.010G147100 N 0.860
Lus10025987.g Linum usitatissimum Lus10025987.g N 0.860
MDP0000301999 Malus domestica MDP0000301999 N 0.860
orange1.1g011373m.g Citrus sinensis orange1.1g011373m.g N 0.860
Pavir.J10443 Panicum virgatum Pavir.J10443 N 0.860
Pavir.J13928 Panicum virgatum Pavir.J13928 N 0.860
Gorai.011G020100 Gossypium raimondii Gorai.011G020100 N 0.860
cassava19346.valid.m1 Manihot esculenta cassava19346.valid.m1 N 0.860
Pavir.Ga00384 Panicum virgatum Pavir.Ga00384 N 0.860
mgf008488m Mimulus guttatus mgf008488m N 0.860
Pavir.Ea03112 Panicum virgatum Pavir.Ea03112 N 0.860
Pavir.Eb03429 Panicum virgatum Pavir.Eb03429 N 0.860
Aquca_028_00271 Aquilegia coerulea Aquca_028_00271 N 0.860
mgf016565m Mimulus guttatus mgf016565m N 0.860
cassava13240.valid.m1 Manihot esculenta cassava13240.valid.m1 N 0.860
Si010139m.g Setaria italica Si010139m.g N 0.860
MLOC_72940 Hordeum vulgare MLOC_72940 N 0.860
MTR_2g011070 Medicago truncatula MTR_2g011070 N 0.860
OB04G33270 Oryza brachyantha OB04G33270 N 0.860
MLOC_37666 Hordeum vulgare MLOC_37666 N 0.860
LPERR01G28830 Leersia perrieri LPERR01G28830 N 0.860
GSMUA_Achr9G12100_001 Musa acuminata GSMUA_Achr9G12100_001 N 0.860
GSMUA_Achr9G24670_001 Musa acuminata GSMUA_Achr9G24670_001 N 0.860
OB05G29420 Oryza brachyantha OB05G29420 N 0.860
OB08G14900 Oryza brachyantha OB08G14900 N 0.860
OGLUM04G26290 Oryza glumaepatula OGLUM04G26290 N 0.860
OGLUM05G23050 Oryza glumaepatula OGLUM05G23050 N 0.860
OGLUM01G37590 Oryza glumaepatula OGLUM01G37590 N 0.860
OBART05G21860 Oryza barthii OBART05G21860 N 0.860
OBART01G33360 Oryza barthii OBART01G33360 N 0.860
OBART04G24870 Oryza barthii OBART04G24870 N 0.860
GSMUA_Achr5G26430_001 Musa acuminata GSMUA_Achr5G26430_001 N 0.860
GSMUA_Achr4G33630_001 Musa acuminata GSMUA_Achr4G33630_001 N 0.860
F775_12027 Aegilops tauschii F775_12027 N 0.860
F775_20405 Aegilops tauschii F775_20405 N 0.860
BGIOSGA020128 Oryza indica BGIOSGA020128 N 0.860
BGIOSGA020126 Oryza indica BGIOSGA020126 N 0.860
BGIOSGA000686 Oryza indica BGIOSGA000686 N 0.860
BGIOSGA017200 Oryza indica BGIOSGA017200 N 0.860
GLYMA13G32320 Glycine max GLYMA13G32320 N 0.860
GLYMA15G07010 Glycine max GLYMA15G07010 N 0.860
GSMUA_Achr10G04860_001 Musa acuminata GSMUA_Achr10G04860_001 N 0.860
GSMUA_Achr11G18680_001 Musa acuminata GSMUA_Achr11G18680_001 N 0.860
GRMZM2G440529 Zea mays GRMZM2G440529 N 0.860
GRMZM2G313058 Zea mays GRMZM2G313058 N 0.860
GRMZM2G004732 Zea mays GRMZM2G004732 N 0.860
GRMZM2G155217 Zea mays GRMZM2G155217 N 0.860
Traes_2AL_70AE1B8B8 Triticum aestivum Traes_2AL_70AE1B8B8 N 0.860
OLONG_006510 Oryza longistaminata OLONG_006510 N 0.860
POPTR_0011s03560 Populus trichocarpa POPTR_0011s03560 N 0.860
PRUPE_ppa005924mg Prunus persica PRUPE_ppa005924mg N 0.860
Sb03g036670 Sorghum bicolor Sb03g036670 N 0.860
POPTR_0007s13360 Populus trichocarpa POPTR_0007s13360 N 0.860
POPTR_0005s12150 Populus trichocarpa POPTR_0005s12150 N 0.860
PGSC0003DMG400013875 Solanum tuberosum PGSC0003DMG400013875 N 0.860
POPTR_0004s02870 Populus trichocarpa POPTR_0004s02870 N 0.860
Sb07g004980 Sorghum bicolor Sb07g004980 N 0.860
Sb09g024720 Sorghum bicolor Sb09g024720 N 0.860
Solyc03g031450.2 Solanum lycopersicum Solyc03g031450.2 N 0.860
TCM_030051 Theobroma cacao TCM_030051 N 0.860
Solyc02g079760.2 Solanum lycopersicum Solyc02g079760.2 N 0.860
Si022548m.g Setaria italica Si022548m.g N 0.860
Si001796m.g Setaria italica Si001796m.g N 0.860
Si013853m.g Setaria italica Si013853m.g N 0.860
OLONG_026655 Oryza longistaminata OLONG_026655 N 0.860
OS04G0631600 Oryza sativa OS04G0631600 N 0.860
ONIVA03G13290 Oryza nivara ONIVA03G13290 N 0.860
ONIVA05G22530 Oryza nivara ONIVA05G22530 N 0.860
OPUNC01G32440 Oryza punctata OPUNC01G32440 N 0.860
ONIVA01G38120 Oryza nivara ONIVA01G38120 N 0.860
OMERI12G12400 Oryza meridionalis OMERI12G12400 N 0.860
OMERI01G30260 Oryza meridionalis OMERI01G30260 N 0.860
OMERI04G21930 Oryza meridionalis OMERI04G21930 N 0.860
ORUFI06G19010 Oryza rufipogon ORUFI06G19010 N 0.860
OPUNC04G23980 Oryza punctata OPUNC04G23980 N 0.860
ORUFI05G23130 Oryza rufipogon ORUFI05G23130 N 0.860
ORUFI01G36520 Oryza rufipogon ORUFI01G36520 N 0.860
ORGLA04G0213700 Oryza glaberrima ORGLA04G0213700 N 0.860
ORGLA05G0190400 Oryza glaberrima ORGLA05G0190400 N 0.860
Cucsa.125970 Cucumis sativus Cucsa.125970 N 0.857
Bra035761 Brassica rapa Bra035761 N 0.849
GLYMA16G24661 Glycine max GLYMA16G24661 N 0.848
cassava21180.m1 Manihot esculenta cassava21180.m1 N 0.840