CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra027653
(
Brassica rapa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Bra027653
T031504_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra027653.1-P
bHLH
405
454
ETANHALSERKRREKLNDRFMTLRSMIPSISKIDKVSILDDTIDYLQELQ
Links
Other
bHLH
family TFs
Other
Brassica rapa
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra027796
Brassica rapa
Bra027796
N
0.914
Thhalv10023356m.g
Eutrema salsugineum
Thhalv10023356m.g
N
0.914
Bo9g029230
Brassica oleracea
Bo9g029230
N
0.914
Cagra.2104s0007
Capsella grandiflora
Cagra.2104s0007
N
0.894
Bostr.29223s0199
Boechera stricta
Bostr.29223s0199
N
0.894
BHLH2
Arabidopsis thaliana
AT1G63650
N
0.894
Carubv10019965m.g
Capsella rubella
Carubv10019965m.g
N
0.894
EGL3
Arabidopsis lyrata
fgenesh2_kg.2__120__AT1G63650.2
N
0.894
Bostr.7200s0145
Boechera stricta
Bostr.7200s0145
I
0.870
Thhalv10027709m.g
Eutrema salsugineum
Thhalv10027709m.g
I
0.870
GL3
Arabidopsis lyrata
fgenesh2_kg.7__3280__AT5G41315.1
I
0.870
Carubv10004345m.g
Capsella rubella
Carubv10004345m.g
I
0.870
GL3
Arabidopsis thaliana
AT5G41315
I
0.870
e_gw1.31.270.1
Physcomitrella patens
e_gw1.31.270.1
N
0.869
SELMODRAFT_73360
Selaginella moellendorffii
SELMODRAFT_73360
N
0.869
SELMODRAFT_87033
Selaginella moellendorffii
SELMODRAFT_87033
N
0.869
Bra025508
Brassica rapa
Bra025508
I
0.857
Bo4g141990
Brassica oleracea
Bo4g141990
I
0.857
gene32494-v1.0-hybrid
Fragaria vesca
gene32494-v1.0-hybrid
I
0.855
POPTR_0003s12810
Populus trichocarpa
POPTR_0003s12810
I
0.855
PRUPE_ppa002762mg
Prunus persica
PRUPE_ppa002762mg
I
0.855
Pm023805
Prunus mume
Pm023805
I
0.855
Sb06g016380
Sorghum bicolor
Sb06g016380
N
0.854
TCM_016261
Theobroma cacao
TCM_016261
I
0.842