CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI3G11520
(
Brachypodium distachyon
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
BRADI3G11520
T031658_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK18401.1
M01126_2.00
Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN
PBM
Lambert et al.(2019)
pTH11272
0.839
0.765
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI3G11520.1
bHLH
40
90
RKVQKADRERMRRDKLNEQFQELGTTLDPDRPRNDKATILGDTIQMLKDLS
Links
Other
bHLH
family TFs
Other
Brachypodium distachyon
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy