CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CapteG36721
(
Capitella teleta
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
CapteG36721
T031882_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nau
M03600_2.00
Drosophila melanogaster
DBAACAGCTGTYVH
DBRACAGCTGTTVH
SELEX
Nitta et al.(2015)
nau_1
0.884
0.942
nau
M03601_2.00
Drosophila melanogaster
NBRACAGCTGACRC
GYGTCAGCTGTYVN
SELEX
Nitta et al.(2015)
nau_2
0.884
0.942
nau
M03602_2.00
Drosophila melanogaster
RCGWCAGCTGWCGC
GCGWCAGCTGWCGY
SELEX
Nitta et al.(2015)
nau_3
0.884
0.942
nau
M05949_2.00
Drosophila melanogaster
CACCTGYY
RRCAGGTG
B1H
Zhu et al.(2011)
nau_da_SANGER_5_FBgn0002922
0.884
0.942
nau
M05950_2.00
Drosophila melanogaster
RACASCTGACGC
GCGTCAGSTGTY
B1H
Zhu et al.(2011)
nau_SANGER_5_FBgn0002922
0.884
0.942
hlh-1
M00746_2.00
Caenorhabditis elegans
RACAGCTGNN
NNCAGCTGTY
PBM
DeMasi et al.(2011)
HLH-1
0.855
0.865
hlh-1
M00929_2.00
Caenorhabditis elegans
GACAGCTG
CAGCTGTC
PBM
Grove et al.(2009)
HLH1
0.855
0.865
hlh-1
M08063_2.00
Caenorhabditis elegans
VAACAGYTGNY
RNCARCTGTTB
ChIP-seq
Mathelier et al.(2014)
MA0545.1
0.855
0.865
hlh-1
M09481_2.00
Caenorhabditis elegans
NNRNCARNTGNY
RNCANYTGNYNN
Misc
Heinz et al.(2010)
cElegans-Embryo-HLH1_modEncode
0.855
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CapteP36721
bHLH
33
84
RRKAATMRERRRLRKVNEAFEHLKRRTCPNPNQRLPKVEILRNAIEYIESLE
Links
Other
bHLH
family TFs
Other
Capitella teleta
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy