CBG13470 (Caenorhabditis briggsae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 CBG13470 T031932_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
hlh-1
M00746_2.00
Caenorhabditis elegans
RACAGCTGNN

NNCAGCTGTY
PBM
DeMasi et al.(2011)
HLH-1
0.914 0.981
hlh-1
M00929_2.00
Caenorhabditis elegans
GACAGCTG

CAGCTGTC
PBM
Grove et al.(2009)
HLH1
0.914 0.981
hlh-1
M08063_2.00
Caenorhabditis elegans
VAACAGYTGNY

RNCARCTGTTB
ChIP-seq
Mathelier et al.(2014)
MA0545.1
0.914 0.981
hlh-1
M09481_2.00
Caenorhabditis elegans
NNRNCARNTGNY

RNCANYTGNYNN
Misc
Heinz et al.(2010)
cElegans-Embryo-HLH1_modEncode
0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG13470 bHLH 161 212

Links

Other bHLH family TFs
Other Caenorhabditis briggsae TFs

Invalid Input OrderBy

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action