CGI_10017809 (Crassostrea gigas)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 CGI_10017809 T032128_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Fer1
M03620_2.00
Drosophila melanogaster
VDCASCTGHY

RDCAGSTGHB
SELEX
Nitta et al.(2015)
Fer1_1
0.914 0.885
Fer1
M05990_2.00
Drosophila melanogaster
HVCASMTGWCV

BGWCAKSTGBD
B1H
Zhu et al.(2011)
Fer1_da_SANGER_10_FBgn0037475
0.914 0.885
Fer1
M05991_2.00
Drosophila melanogaster
WYRHCAGCTGACG

CGTCAGCTGDYRW
B1H
Zhu et al.(2011)
Fer1_SANGER_5_FBgn0037475
0.914 0.885
PTF1A
M04156_2.00
Homo sapiens
AACAGCTGACRB

VYGTCAGCTGTT
SELEX
Yin et al.(2017)
PTF1A_eDBD_HT-SELEX
0.894 0.865
PTF1A
M08736_2.00
Homo sapiens
SCAGCTGBYNBNNYYYHN

NDRRRNNVNRVCAGCTGS
Misc
Kulakovskiy et al.(2013)
PTF1A_HUMAN.H11MO.0.B
0.894 0.865
Ptf1a
M08757_2.00
Mus musculus
SCAGCTGBYNBNNYYYHN

NDRRRNNVNRVCAGCTGS
Misc
Kulakovskiy et al.(2013)
PTF1A_MOUSE.H11MO.0.A
0.894 0.865
Ptf1a
M09470_2.00
Mus musculus
NVVCASSTGB

VCASSTGBBN
Misc
Heinz et al.(2010)
Panc1-Ptf1a_GSE47459
0.894 0.865
PTF1A
M04157_2.00
Homo sapiens
AMCAGCTGACRB

VYGTCAGCTGKT
SELEX
Yin et al.(2017)
PTF1A_eDBD_Methyl-HT-SELEX
0.894 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC26904 bHLH 62 114

Links

Other bHLH family TFs
Other Crassostrea gigas TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GJ24574 Drosophila virilis FBgn0211653 I 0.914
GD19915 Drosophila simulans FBgn0191398 I 0.914
GK14521 Drosophila willistoni FBgn0216527 I 0.914
MDOA013156 Musca domestica MDOA013156 I 0.914
GA27498 Drosophila pseudoobscura FBgn0248864 I 0.914
GM10936 Drosophila sechellia FBgn0165881 I 0.914
GL12422 Drosophila persimilis FBgn0150028 I 0.914
GF17655 Drosophila ananassae FBgn0094673 I 0.914
Fer1 Drosophila melanogaster FBgn0037475 D 0.914
GG13863 Drosophila erecta FBgn0106126 I 0.914
GH19006 Drosophila grimshawi FBgn0126473 I 0.914
GI23061 Drosophila mojavensis FBgn0145788 I 0.914
RPRC001881 Rhodnius prolixus RPRC001881 I 0.914
GE24907 Drosophila yakuba FBgn0242002 I 0.914
Sakowv30041452m.g Saccoglossus kowalevskii Sakowv30041452m.g I 0.914
ACYPI37626 Acyrthosiphon pisum ACYPI37626 I 0.914
CLEC012470 Cimex lectularius CLEC012470 I 0.914
LCUP002382 Lucilia cuprina LCUP002382 I 0.914
ptf1a.S Xenopus laevis XB-GENE-6466546 I 0.894
PTF1A Tursiops truncatus ENSTTRG00000016843 I 0.894
ENSTGUG00000001180 Taeniopygia guttata ENSTGUG00000001180 I 0.894
ENSSTOG00000022679 Ictidomys tridecemlineatus ENSSTOG00000022679 I 0.894
ENSPPYG00000002150 Pongo abelii ENSPPYG00000002150 I 0.894
ENSPSIG00000007810 Pelodiscus sinensis ENSPSIG00000007810 I 0.894
ENSPVAG00000013738 Pteropus vampyrus ENSPVAG00000013738 I 0.894
Ptf1a Rattus norvegicus ENSRNOG00000016902 I 0.894
PTF1A Sus scrofa ENSSSCG00000030662 I 0.894
LDEC016362 Leptinotarsa decemlineata LDEC016362 I 0.894
YQE_02105 Dendroctonus ponderosae YQE_02105 I 0.894
L798_11980 Zootermopsis nevadensis L798_11980 I 0.894
PHUM498120 Pediculus humanus PHUM498120 I 0.894
Pvit_04136 Pogona vitticeps Pvit_04136 I 0.894
estExt_fgenesh2_pg.C_640081 Branchiostoma floridae estExt_fgenesh2_pg.C_640081 I 0.894
TC014105 Tribolium castaneum TC014105 I 0.894
estExt_GenewiseH_1.C_3210011 Branchiostoma floridae estExt_GenewiseH_1.C_3210011 I 0.894
estExt_GenewiseH_1.C_3210010 Branchiostoma floridae estExt_GenewiseH_1.C_3210010 I 0.894
ptf1a Xenopus tropicalis XB-GENE-484425 I 0.894
BGLB003958 Biomphalaria glabrata BGLB003958 I 0.894
PTF1A Homo sapiens ENSG00000168267 D 0.894
PTF1A Gorilla gorilla ENSGGOG00000015210 I 0.894
ENSLACG00000013727 Latimeria chalumnae ENSLACG00000013727 I 0.894
PTF1A Loxodonta africana ENSLAFG00000012682 I 0.894
ENSFALG00000007280 Ficedula albicollis ENSFALG00000007280 I 0.894
PTF1A Equus caballus ENSECAG00000012711 I 0.894
ENSCSAG00000012422 Chlorocebus sabaeus ENSCSAG00000012422 I 0.894
PTF1A Cavia porcellus ENSCPOG00000022828 I 0.894
PTF1A Dasypus novemcinctus ENSDNOG00000035978 I 0.894
PTF1A Myotis lucifugus ENSMLUG00000010122 I 0.894
ENSMEUG00000004292 Macropus eugenii ENSMEUG00000004292 I 0.894
ENSAMEG00000006374 Ailuropoda melanoleuca ENSAMEG00000006374 I 0.894
PTF1A Bos taurus ENSBTAG00000047315 I 0.894
PTF1A Otolemur garnettii ENSOGAG00000024685 I 0.894
Ptf1a Mus musculus ENSMUSG00000026735 D 0.894
PTF1A Callithrix jacchus ENSCJAG00000007862 I 0.894
PTF1A Monodelphis domestica ENSMODG00000008946 I 0.894
PTF1A Procavia capensis ENSPCAG00000005440 I 0.894
ENSPANG00000023093 Papio anubis ENSPANG00000023093 I 0.894
ENSNLEG00000012897 Nomascus leucogenys ENSNLEG00000012897 I 0.894
PTF1A Anolis carolinensis ENSACAG00000008717 I 0.893
AGAP001448 Anopheles gambiae AGAP001448 I 0.890
SMU15024587 Schmidtea mediterranea SMU15024587 I 0.890
SMU15028020 Schmidtea mediterranea SMU15028020 I 0.890
CPIJ006258 Culex quinquefasciatus CPIJ006258 I 0.890
Ocbimv22012139m.g Octopus bimaculoides Ocbimv22012139m.g I 0.890
TTRE_0000022101 Trichuris trichiura TTRE_0000022101 I 0.890
TMUE_s0036001100 Trichuris muris TMUE_s0036001100 I 0.890
AARA001906 Anopheles arabiensis AARA001906 I 0.890
ACUA004590 Anopheles culicifacies ACUA004590 I 0.890
ADIR010545 Anopheles dirus ADIR010545 I 0.890
AEPI006242 Anopheles epiroticus AEPI006242 I 0.890
AFAF002909 Anopheles farauti AFAF002909 I 0.890
ACOM034154 Anopheles coluzzii ACOM034154 I 0.890
ACHR004799 Anopheles christyi ACHR004799 I 0.890
ADAC008497 Anopheles darlingi ADAC008497 I 0.890
AAEL008660 Aedes aegypti AAEL008660 I 0.890
AALB002674 Anopheles albimanus AALB002674 I 0.890
AATE014019 Anopheles atroparvus AATE014019 I 0.890
AMAM018725 Anopheles maculatus AMAM018725 I 0.890
NEMVEDRAFT_v1g97005 Nematostella vectensis NEMVEDRAFT_v1g97005 I 0.890
D918_01499 Trichuris suis D918_01499 I 0.890
HelroG86431 Helobdella robusta HelroG86431 I 0.890
AFUN008310 Anopheles funestus AFUN008310 I 0.890
LLOJ003726 Lutzomyia longipalpis LLOJ003726 I 0.890
PPAI005132 Phlebotomus papatasi PPAI005132 I 0.890
LLOJ004204 Lutzomyia longipalpis LLOJ004204 I 0.890
CpipJ_CPIJ006258 Culex pipiens CpipJ_CPIJ006258 I 0.890
ASIS019386 Anopheles sinensis ASIS019386 I 0.890
AMEC009154 Anopheles melas AMEC009154 I 0.890
AMIN003266 Anopheles minimus AMIN003266 I 0.890
LLOJ005004 Lutzomyia longipalpis LLOJ005004 I 0.890
MESCA008421 Megaselia scalaris MESCA008421 I 0.890
AQUA006634 Anopheles quadriannulatus AQUA006634 I 0.890
AMEM011331 Anopheles merus AMEM011331 I 0.890
SROB_0001629701 Schistosoma rodhaini SROB_0001629701 I 0.870
csin111295 Clonorchis sinensis csin111295 I 0.870
D917_00545 Trichinella nativa D917_00545 I 0.870
T265_12589 Opisthorchis viverrini T265_12589 I 0.870
ECPE_0000418201 Echinostoma caproni ECPE_0000418201 I 0.870
D915_00775 Fasciola hepatica D915_00775 I 0.870
ISCW003737 Ixodes scapularis ISCW003737 I 0.870
ENSGMOG00000016849 Gadus morhua ENSGMOG00000016849 I 0.870
ENSONIG00000016978 Oreochromis niloticus ENSONIG00000016978 I 0.870
ptf1a Oryzias latipes ENSORLG00000008277 I 0.870
ptf1a Gasterosteus aculeatus ENSGACG00000014760 I 0.870
ptf1a Danio rerio ENSDARG00000014479 I 0.870
DAPPUDRAFT_18360 Daphnia pulex DAPPUDRAFT_18360 I 0.870
EFV58245 Trichinella spiralis EFV58245 I 0.870
ENSAMXG00000008222 Astyanax mexicanus ENSAMXG00000008222 I 0.870
ENSPFOG00000002486 Poecilia formosa ENSPFOG00000002486 I 0.870
ENSLOCG00000003186 Lepisosteus oculatus ENSLOCG00000003186 I 0.870
ENSPMAG00000003727 Petromyzon marinus ENSPMAG00000003727 I 0.870
SMAR009985 Strigamia maritima SMAR009985 I 0.870
SMAR011911 Strigamia maritima SMAR011911 I 0.870
KGM_14030 Danaus plexippus KGM_14030 I 0.870
LotgiG66849 Lottia gigantea LotgiG66849 I 0.870
ptf1a Takifugu rubripes ENSTRUG00000007713 I 0.870
ENSXMAG00000015151 Xiphophorus maculatus ENSXMAG00000015151 I 0.870
SBAD_0000858001 Soboliphyme baturini SBAD_0000858001 I 0.868
CapteG59283 Capitella teleta CapteG59283 I 0.866
PTF1A Tupaia belangeri ENSTBEG00000005210 I 0.859
DILT_0001058801 Diphyllobothrium latum DILT_0001058801 I 0.857
SMU15033768 Schmidtea mediterranea SMU15033768 I 0.849
SPU_002677 Strongylocentrotus purpuratus SPU_002677 I 0.846
HmN_000218700 Hymenolepis microstoma HmN_000218700 I 0.846
ECANG7_07852 Echinococcus canadensis ECANG7_07852 I 0.846
EmuJ_000998300 Echinococcus multilocularis EmuJ_000998300 I 0.846
MCOS_0000879301 Mesocestoides corti MCOS_0000879301 I 0.846