CGI_10025278 (Crassostrea gigas)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 CGI_10025278 T032146_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arntl
M01751_2.00 		Mus musculus
NCACGTGAYN
NRTCACGTGN		 PBM
Weirauch et al.(2014)
pTH5064 		0.858 0.741
ARNTL
M02787_2.00 		Homo sapiens
GTCACGTGAC
GTCACGTGAC		 SELEX
Jolma et al.(2013)
ARNTL_1 		0.858 0.741
ARNTL
M04124_2.00 		Homo sapiens
RDCACGTGHN
NDCACGTGHY		 SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX 		0.858 0.741
ARNTL
M08725_2.00 		Homo sapiens
NVDCACGTGBN
NVCACGTGHBN		 Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A 		0.858 0.741
Arntl
M08776_2.00 		Mus musculus
VCACGTGMN
NKCACGTGB		 Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A 		0.858 0.741
Arntl
M09478_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860 		0.858 0.741
Arntl
M09889_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_01 		0.858 0.741
ARNTL
M09841_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_Q6 		0.858 0.741
ARNTL
M04125_2.00 		Homo sapiens
NDCACRTGHY
RDCAYGTGHN		 SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX 		0.858 0.741
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC42110 bHLH 69 122

Links

Other bHLH family TFs
Other Crassostrea gigas TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_pg.scaffold_279000045 Branchiostoma floridae fgenesh2_pg.scaffold_279000045 I 0.892
Ocbimv22023737m.g Octopus bimaculoides Ocbimv22023737m.g I 0.892
fgenesh2_pg.scaffold_792000016 Branchiostoma floridae fgenesh2_pg.scaffold_792000016 I 0.892
NEMVEDRAFT_v1g132249 Nematostella vectensis NEMVEDRAFT_v1g132249 I 0.892
NEMVEDRAFT_v1g224692 Nematostella vectensis NEMVEDRAFT_v1g224692 I 0.892
ENSTGUG00000015954 Taeniopygia guttata ENSTGUG00000015954 I 0.858
ENSTGUG00000014839 Taeniopygia guttata ENSTGUG00000014839 I 0.858
arntl1a Tetraodon nigroviridis ENSTNIG00000005490 I 0.858
ENSTSYG00000000577 Tarsius syrichta ENSTSYG00000000577 I 0.858
ARNTL Tupaia belangeri ENSTBEG00000017387 I 0.858
ARNTL Tursiops truncatus ENSTTRG00000013925 I 0.858
arntl1a Takifugu rubripes ENSTRUG00000008391 I 0.858
ARNTL Sus scrofa ENSSSCG00000013397 I 0.858
ARNTL Pan troglodytes ENSPTRG00000003376 I 0.858
ENSPSIG00000013131 Pelodiscus sinensis ENSPSIG00000013131 I 0.858
ENSPPYG00000003473 Pongo abelii ENSPPYG00000003473 I 0.858
ARNTL Pteropus vampyrus ENSPVAG00000006712 I 0.858
Arntl Rattus norvegicus ENSRNOG00000014448 D 0.858
ARNTL Vicugna pacos ENSVPAG00000005926 I 0.858
ENSSHAG00000017357 Sarcophilus harrisii ENSSHAG00000017357 I 0.858
ENSSTOG00000022144 Ictidomys tridecemlineatus ENSSTOG00000022144 I 0.858
Aan_R006598 Calypte anna Aan_R006598 I 0.858
Pvit_10294 Pogona vitticeps Pvit_10294 I 0.858
Ogr18318 Ophisaurus gracilis Ogr18318 I 0.858
Myotis_brandtii_Arntl_10004678 Myotis brandtii Myotis_brandtii_Arntl_10004678 I 0.858
Tal_R003521 Tyto alba Tal_R003521 I 0.858
arntl.L Xenopus laevis XB-GENE-17342306 I 0.858
arntl.S Xenopus laevis XB-GENE-495459 I 0.858
arntl Xenopus tropicalis XB-GENE-495455 I 0.858
Gfo_R013617 Geospiza fortis Gfo_R013617 I 0.858
ENSP00000384517 Macaca fascicularis ENSP00000384517 I 0.858
Afo_R014608 Aptenodytes forsteri Afo_R014608 I 0.858
ENSPFOG00000008027 Poecilia formosa ENSPFOG00000008027 I 0.858
Alligator_sinensis_CCG000787.1 Alligator sinensis Alligator_sinensis_CCG000787.1 I 0.858
Brh_R010633 Buceros rhinoceros Brh_R010633 I 0.858
ENSBTAP00000017323-D1 Bos grunniens ENSBTAP00000017323-D1 I 0.858
Cmyd_10009262 Chelonia mydas Cmyd_10009262 I 0.858
ENSXMAG00000015619 Xiphophorus maculatus ENSXMAG00000015619 I 0.858
arntl1a Oryzias latipes ENSORLG00000019370 I 0.858
Arntl Dipodomys ordii ENSDORG00000015539 I 0.858
ARNTL Dasypus novemcinctus ENSDNOG00000003841 I 0.858
arntl1b Danio rerio ENSDARG00000035732 I 0.858
ARNTL Equus caballus ENSECAG00000012118 I 0.858
ENSFALG00000010646 Ficedula albicollis ENSFALG00000010646 I 0.858
arntl1a Gasterosteus aculeatus ENSGACG00000002445 I 0.858
ARNTL Homo sapiens ENSG00000133794 D 0.858
ARNTL Felis catus ENSFCAG00000010983 I 0.858
arntl1a Danio rerio ENSDARG00000006791 I 0.858
ENSCSAG00000004681 Chlorocebus sabaeus ENSCSAG00000004681 I 0.858
ENSAPLG00000003885 Anas platyrhynchos ENSAPLG00000003885 I 0.858
ENSAMXG00000011758 Astyanax mexicanus ENSAMXG00000011758 I 0.858
ENSAMEG00000002309 Ailuropoda melanoleuca ENSAMEG00000002309 I 0.858
ARNTL Bos taurus ENSBTAG00000013029 I 0.858
ARNTL Canis familiaris ENSCAFG00000008095 I 0.858
ARNTL Cavia porcellus ENSCPOG00000008795 I 0.858
ARNTL Callithrix jacchus ENSCJAG00000010162 I 0.858
ARNTL Choloepus hoffmanni ENSCHOG00000000376 I 0.858
ARNTL Gallus gallus ENSGALG00000005378 I 0.858
ARNTL Gorilla gorilla ENSGGOG00000013211 I 0.858
ENSOANG00000000503 Ornithorhynchus anatinus ENSOANG00000000503 I 0.858
ENSNLEG00000017674 Nomascus leucogenys ENSNLEG00000017674 I 0.858
Arntl Mus musculus ENSMUSG00000055116 D 0.858
ENSOARG00000007809 Ovis aries ENSOARG00000007809 I 0.858
ARNTL Oryctolagus cuniculus ENSOCUG00000005940 I 0.858
ARNTL Ochotona princeps ENSOPRG00000004853 I 0.858
ENSONIG00000010970 Oreochromis niloticus ENSONIG00000010970 I 0.858
ARNTL Otolemur garnettii ENSOGAG00000000736 I 0.858
ENSMPUG00000013135 Mustela putorius furo ENSMPUG00000013135 I 0.858
ARNTL Monodelphis domestica ENSMODG00000008708 I 0.858
ENSLOCG00000003999 Lepisosteus oculatus ENSLOCG00000003999 I 0.858
ARNTL Loxodonta africana ENSLAFG00000026673 I 0.858
ENSGMOG00000008906 Gadus morhua ENSGMOG00000008906 I 0.858
ARNTL Meleagris gallopavo ENSMGAG00000005349 I 0.858
ENSMICG00000001229 Microcebus murinus ENSMICG00000001229 I 0.858
ARNTL Macaca mulatta ENSMMUG00000009690 I 0.858
ARNTL Myotis lucifugus ENSMLUG00000008503 I 0.858
ARNTL Anolis carolinensis ENSACAG00000004497 I 0.858