CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CJA11661
(
Caenorhabditis japonica
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
CJA11661
T032202_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hlh-16
M00589_2.00
Caenorhabditis elegans
NNNCAATATKKNN
NNMMATATTGNNN
PBM
Narasimhan et al.(2015)
pTH9974
0.890
0.964
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA11661a
bHLH
51
105
LRNSINSRERRRMHELNDEFEALRECLPYPNEANSRRMSKANTLLLASNWIKQLS
CJA11661b
bHLH
51
105
LRNSINSRERRRMHELNDEFEALRECLPYPNEANSRRMSKANTLLLASNWIKQLS
Links
Other
bHLH
family TFs
Other
Caenorhabditis japonica
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG12364
Caenorhabditis briggsae
CBG12364
I
0.914
hlh-16
Caenorhabditis elegans
WBGene00001960
D
0.890
CRE29755
Caenorhabditis remanei
CRE29755
I
0.890