CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE25281
(
Caenorhabditis remanei
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
CRE25281
T032473_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hlh-11
M00931_2.00
Caenorhabditis elegans
ATCAGCTGA
TCAGCTGAT
PBM
Grove et al.(2009)
HLH11
0.914
0.962
crp
M03595_2.00
Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT
SELEX
Nitta et al.(2015)
crp_1
0.879
0.750
crp
M05937_2.00
Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB
B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994
0.879
0.750
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE25281
bHLH
113
164
RRQIANCNERRRMQSINAGFMALRALLPRKEGEKLSKAAILQQTAEMVHQLL
Links
Other
bHLH
family TFs
Other
Caenorhabditis remanei
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy