CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DAPPUDRAFT_201893
(
Daphnia pulex
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
DAPPUDRAFT_201893
T032546_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HLH106
M03626_2.00
Drosophila melanogaster
RTCACGTGAY
RTCACGTGAY
SELEX
Nitta et al.(2015)
HLH106_1
0.851
0.686
HLH106
M03627_2.00
Drosophila melanogaster
NRTCACGCCAYH
DRTGGCGTGAYN
SELEX
Nitta et al.(2015)
HLH106_2
0.851
0.686
Srebf1
M00754_2.00
Mus musculus
VWCAYVYSAB
VTSRBRTGWB
PBM
Weirauch et al.(2013)
pTH0914
0.851
0.667
Srebf1
M01724_2.00
Mus musculus
RWCAYVYBD
HVRBRTGWY
PBM
Weirauch et al.(2014)
pTH5161
0.851
0.667
Srebf1
M02816_2.00
Mus musculus
RTCACGTGAY
RTCACGTGAY
SELEX
Jolma et al.(2013)
Srebf1_1
0.851
0.667
SREBF1
M04062_2.00
Homo sapiens
VHCACVCSAY
RTSGBGTGDB
SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_1
0.851
0.667
SREBF1
M04063_2.00
Homo sapiens
VHCRCGYGDB
VHCRCGYGDB
SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_2
0.851
0.667
SREBF1
M08048_2.00
Homo sapiens
VTCACSCCAY
RTGGSGTGAB
ChIP-seq
Mathelier et al.(2014)
MA0595.1
0.851
0.667
SREBF1
M08711_2.00
Homo sapiens
VTCACVYSAYH
DRTSRBGTGAB
Misc
Kulakovskiy et al.(2013)
SRBP1_HUMAN.H11MO.0.A
0.851
0.667
Srebf1
M08749_2.00
Mus musculus
VTCASSYSABN
NVTSRSSTGAB
Misc
Kulakovskiy et al.(2013)
SRBP1_MOUSE.H11MO.0.B
0.851
0.667
SREBF1
M09796_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBF1_02
0.851
0.667
SREBF1
M09797_2.00
Homo sapiens
NATCACGTGAB
VTCACGTGATN
Transfac
Matys et al.(2006)
V$SREBP1_01
0.851
0.667
SREBF1
M09798_2.00
Homo sapiens
KRTCACCCCAC
GTGGGGTGAYM
Transfac
Matys et al.(2006)
V$SREBP1_02
0.851
0.667
SREBF1
M09799_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q5
0.851
0.667
SREBF1
M09800_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q6_01
0.851
0.667
SREBF1
M09801_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q6
0.851
0.667
SREBF1
M04064_2.00
Homo sapiens
MTCACVCCAY
RTGGBGTGAK
SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_1
0.851
0.667
SREBF1
M04065_2.00
Homo sapiens
RTCACCTGAY
RTCAGGTGAY
SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_2
0.851
0.667
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX71248
bHLH
19
69
KKSSHNAIERRYRNSINDKILELKNLIAGEEAKMSKSAILRKALEYVRYLQ
Links
Other
bHLH
family TFs
Other
Daphnia pulex
TFs
79 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Hsal_02671--XP_396866.3_APIME
Harpegnathos saltator
Hsal_02671--XP_396866.3_APIME
I
0.853
L798_14382
Zootermopsis nevadensis
L798_14382
I
0.853
SINV16629
Solenopsis invicta
SINV16629
I
0.853
SMAR011485
Strigamia maritima
SMAR011485
I
0.853
GB54953
Apis mellifera
GB54953
I
0.853
ENSXMAG00000014774
Xiphophorus maculatus
ENSXMAG00000014774
I
0.851
SREBP
Drosophila persimilis
FBgn0153336
I
0.851
SREBP
Drosophila pseudoobscura
FBgn0081122
I
0.851
SREBP
Drosophila grimshawi
FBgn0122129
I
0.851
SREBP
Drosophila erecta
FBgn0108291
I
0.851
SREBP
Drosophila ananassae
FBgn0100584
I
0.851
srebf1
Tetraodon nigroviridis
ENSTNIG00000011957
I
0.851
SREBF1
Pteropus vampyrus
ENSPVAG00000005765
I
0.851
ENSPPYG00000008037
Pongo abelii
ENSPPYG00000008037
I
0.851
ENSPFOG00000010306
Poecilia formosa
ENSPFOG00000010306
I
0.851
Srebf1
Rattus norvegicus
ENSRNOG00000003463
I
0.851
ENSSHAG00000018607
Sarcophilus harrisii
ENSSHAG00000018607
I
0.851
SREBF1
Taeniopygia guttata
ENSTGUG00000007313
I
0.851
ENSSTOG00000014939
Ictidomys tridecemlineatus
ENSSTOG00000014939
I
0.851
ENSSSCG00000023124
Sus scrofa
ENSSSCG00000023124
I
0.851
SREBP
Drosophila sechellia
FBgn0174544
I
0.851
SREBP
Drosophila yakuba
FBgn0236960
I
0.851
Myotis_brandtii_SREBF1_10023215
Myotis brandtii
Myotis_brandtii_SREBF1_10023215
I
0.851
Gfo_R006283
Geospiza fortis
Gfo_R006283
I
0.851
ENSP00000348069
Macaca fascicularis
ENSP00000348069
I
0.851
LCUP004742
Lucilia cuprina
LCUP004742
I
0.851
srebf1
Xenopus tropicalis
XB-GENE-987572
I
0.851
MDOA000648
Musca domestica
MDOA000648
I
0.851
XP_002944649
Xenopus tropicalis
XP_002944649
I
0.851
Aan_R009070
Calypte anna
Aan_R009070
I
0.851
YQE_07365
Dendroctonus ponderosae
YQE_07365
I
0.851
SREBP
Drosophila willistoni
FBgn0219495
I
0.851
SREBP
Drosophila virilis
FBgn0198580
I
0.851
ENSPANG00000023675
Papio anubis
ENSPANG00000023675
I
0.851
HLH106
Drosophila melanogaster
FBgn0261283
D
0.851
NV10553
Nasonia vitripennis
NV10553
I
0.851
LotgiG224211
Lottia gigantea
LotgiG224211
I
0.851
SREBP
Drosophila simulans
FBgn0186498
I
0.851
SREBF1
Procavia capensis
ENSPCAG00000014903
I
0.851
ENSFALG00000013762
Ficedula albicollis
ENSFALG00000013762
I
0.851
SREBF1
Echinops telfairi
ENSETEG00000004179
I
0.851
SREBF1
Equus caballus
ENSECAG00000019802
I
0.851
SREBF1
Felis catus
ENSFCAG00000001983
I
0.851
SREBF1
Homo sapiens
ENSG00000072310
D
0.851
SREBF1
Gorilla gorilla
ENSGGOG00000002713
I
0.851
srebf1
Gasterosteus aculeatus
ENSGACG00000012064
I
0.851
Srebf1
Dipodomys ordii
ENSDORG00000012333
I
0.851
srebf1
Danio rerio
ENSDARG00000067607
I
0.851
SREBF1
Bos taurus
ENSBTAG00000007884
I
0.851
ENSAMXG00000009016
Astyanax mexicanus
ENSAMXG00000009016
I
0.851
ENSAMEG00000005129
Ailuropoda melanoleuca
ENSAMEG00000005129
I
0.851
SREBF1
Canis familiaris
ENSCAFG00000018436
I
0.851
SREBF1
Callithrix jacchus
ENSCJAG00000008953
I
0.851
ENSCSAG00000008412
Chlorocebus sabaeus
ENSCSAG00000008412
I
0.851
SREBF1
Cavia porcellus
ENSCPOG00000002439
I
0.851
ENSLACG00000013149
Latimeria chalumnae
ENSLACG00000013149
I
0.851
SREBF1
Gallus gallus
ENSGALG00000027188
I
0.851
SREBF1
Ornithorhynchus anatinus
ENSOANG00000012278
I
0.851
ENSNLEG00000013625
Nomascus leucogenys
ENSNLEG00000013625
I
0.851
Srebf1
Mus musculus
ENSMUSG00000020538
D
0.851
ENSMPUG00000000024
Mustela putorius furo
ENSMPUG00000000024
I
0.851
ENSOARG00000001504
Ovis aries
ENSOARG00000001504
I
0.851
SREBF1
Otolemur garnettii
ENSOGAG00000002910
I
0.851
srebf1
Oryzias latipes
ENSORLG00000009437
I
0.851
SREBF1
Ochotona princeps
ENSOPRG00000015069
I
0.851
ENSONIG00000002304
Oreochromis niloticus
ENSONIG00000002304
I
0.851
SREBF1
Loxodonta africana
ENSLAFG00000021644
I
0.851
SREBF1
Monodelphis domestica
ENSMODG00000014074
I
0.851
ENSLOCG00000008766
Lepisosteus oculatus
ENSLOCG00000008766
I
0.851
SREBF1
Macaca mulatta
ENSMMUG00000023375
I
0.851
ENSMEUG00000001306
Macropus eugenii
ENSMEUG00000001306
I
0.851
SREBF1
Microcebus murinus
ENSMICG00000012535
I
0.851
HMEL008680
Heliconius melpomene
HMEL008680
I
0.848
KGM_21476
Danaus plexippus
KGM_21476
I
0.848
ENSGALG00000011916
Gallus gallus
ENSGALG00000011916
I
0.840
ENSAPLG00000003145
Anas platyrhynchos
ENSAPLG00000003145
I
0.840
SREBF2
Meleagris gallopavo
ENSMGAG00000012074
I
0.840
CPIJ008607
Culex quinquefasciatus
CPIJ008607
I
0.839
CpipJ_CPIJ008607
Culex pipiens
CpipJ_CPIJ008607
I
0.839