EFV52759 (Trichinella spiralis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 EFV52759 T032651_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nau
M03600_2.00
Drosophila melanogaster
DBAACAGCTGTYVH

DBRACAGCTGTTVH
SELEX
Nitta et al.(2015)
nau_1
0.884 0.942
nau
M03601_2.00
Drosophila melanogaster
NBRACAGCTGACRC

GYGTCAGCTGTYVN
SELEX
Nitta et al.(2015)
nau_2
0.884 0.942
nau
M03602_2.00
Drosophila melanogaster
RCGWCAGCTGWCGC

GCGWCAGCTGWCGY
SELEX
Nitta et al.(2015)
nau_3
0.884 0.942
nau
M05949_2.00
Drosophila melanogaster
CACCTGYY

RRCAGGTG
B1H
Zhu et al.(2011)
nau_da_SANGER_5_FBgn0002922
0.884 0.942
nau
M05950_2.00
Drosophila melanogaster
RACASCTGACGC

GCGTCAGSTGTY
B1H
Zhu et al.(2011)
nau_SANGER_5_FBgn0002922
0.884 0.942
Myf6
M00120_2.00
Mus musculus
NCRNNTGNY

RNCANNYGN
PBM
Badis et al.(2009)
Myf6_3824
0.844 0.808
Myf6
M01742_2.00
Mus musculus
RACAGHTGH

DCADCTGTY
PBM
Weirauch et al.(2014)
pTH5099
0.844 0.808
MYF6
M02780_2.00
Homo sapiens
AACARCTGTY

RACAGYTGTT
SELEX
Jolma et al.(2013)
MYF6_1
0.844 0.808
MYF6
M04084_2.00
Homo sapiens
BRHCASSTGWCR

YGWCASSTGDYV
SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_1
0.844 0.808
MYF6
M04085_2.00
Homo sapiens
NRACASSTGWYV

BRWCASSTGTYN
SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_2
0.844 0.808
MYF6
M05831_2.00
Homo sapiens
BRACAKNTGNY

RNCANMTGTYV
SMiLE-seq
Isakova et al.(2017)
MYF6
0.844 0.808
MYF6
M08717_2.00
Homo sapiens
CASCTGC

GCAGSTG
Misc
Kulakovskiy et al.(2013)
MYF6_HUMAN.H11MO.0.C
0.844 0.808
Myf6
M08767_2.00
Mus musculus
CASCTGC

GCAGSTG
Misc
Kulakovskiy et al.(2013)
MYF6_MOUSE.H11MO.0.C
0.844 0.808
MYF6
M09820_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MRF4_Q3
0.844 0.808
MYF6
M04086_2.00
Homo sapiens
BRHCASSTGWCR

YGWCASSTGDYV
SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_1
0.844 0.808
MYF6
M04087_2.00
Homo sapiens
BAACASSTGWYV

BRWCASSTGTTV
SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_2
0.844 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFV52759 bHLH 194 245

Links

Other bHLH family TFs
Other Trichinella spiralis TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL014322 Aedes aegypti AAEL014322 I 0.860
AALB008334 Anopheles albimanus AALB008334 I 0.860
Aan_R006110 Calypte anna Aan_R006110 I 0.844
AAO11649 Xenopus laevis AAO11649 I 0.844
AARA002094 Anopheles arabiensis AARA002094 I 0.860
AATE018889 Anopheles atroparvus AATE018889 I 0.860
ABU42126 Xenopus laevis ABU42126 I 0.844
ACHR010174 Anopheles christyi ACHR010174 I 0.860
ACOM034431 Anopheles coluzzii ACOM034431 I 0.860
ACUA006973 Anopheles culicifacies ACUA006973 I 0.860
ADAC002492 Anopheles darlingi ADAC002492 I 0.860
ADIR010448 Anopheles dirus ADIR010448 I 0.860
AEPI006062 Anopheles epiroticus AEPI006062 I 0.860
AFAF001067 Anopheles farauti AFAF001067 I 0.860
Afo_R014067 Aptenodytes forsteri Afo_R014067 I 0.844
AFUN011634 Anopheles funestus AFUN011634 I 0.860
Alligator_sinensis_CCG017418.1 Alligator sinensis Alligator_sinensis_CCG017418.1 I 0.844
Alligator_sinensis_CCG017419.1 Alligator sinensis Alligator_sinensis_CCG017419.1 I 0.846
AMAM006832 Anopheles maculatus AMAM006832 I 0.860
AMEM001613 Anopheles merus AMEM001613 I 0.860
AMIN003460 Anopheles minimus AMIN003460 I 0.860
AQUA000514 Anopheles quadriannulatus AQUA000514 I 0.860
ASTEI05690 Anopheles stephensi ASTEI05690 I 0.860
A_07871 Schistosoma haematobium A_07871 I 0.901
Brh_R000054 Buceros rhinoceros Brh_R000054 I 0.846
CapteG36721 Capitella teleta CapteG36721 I 0.884
Cflo_03885--XP_001120527.1_APIME Camponotus floridanus Cflo_03885--XP_001120527.1_APIME I 0.884
CGI_10007380 Crassostrea gigas CGI_10007380 I 0.884
CLEC002330 Cimex lectularius CLEC002330 I 0.914
CPIJ005345 Culex quinquefasciatus CPIJ005345 I 0.860
CpipJ_CPIJ005345 Culex pipiens CpipJ_CPIJ005345 I 0.860
csin100742 Clonorchis sinensis csin100742 I 0.901
D915_09890 Fasciola hepatica D915_09890 I 0.901
D917_06339 Trichinella nativa D917_06339 I 0.914
D918_04086 Trichuris suis D918_04086 I 0.914
ECANG7_02004 Echinococcus canadensis ECANG7_02004 I 0.850
ECPE_0001678601 Echinostoma caproni ECPE_0001678601 I 0.901
EmuJ_001053100 Echinococcus multilocularis EmuJ_001053100 I 0.850
ENSAMEG00000013207 Ailuropoda melanoleuca ENSAMEG00000013207 I 0.844
ENSAMXG00000000428 Astyanax mexicanus ENSAMXG00000000428 I 0.846
ENSAMXG00000017040 Astyanax mexicanus ENSAMXG00000017040 I 0.846
ENSAPLG00000001124 Anas platyrhynchos ENSAPLG00000001124 I 0.846
ENSAPLG00000002254 Anas platyrhynchos ENSAPLG00000002254 I 0.844
ENSCPOG00000007763 Cavia porcellus ENSCPOG00000007763 I 0.844
ENSCSAG00000003893 Chlorocebus sabaeus ENSCSAG00000003893 I 0.844
ENSFALG00000010503 Ficedula albicollis ENSFALG00000010503 I 0.844
ENSFALG00000010507 Ficedula albicollis ENSFALG00000010507 I 0.846
ENSMEUG00000010618 Macropus eugenii ENSMEUG00000010618 I 0.844
ENSMEUG00000010628 Macropus eugenii ENSMEUG00000010628 I 0.846
ENSMGAG00000011091 Meleagris gallopavo ENSMGAG00000011091 I 0.846
ENSMPUG00000004945 Mustela putorius furo ENSMPUG00000004945 I 0.844
ENSNLEG00000005194 Nomascus leucogenys ENSNLEG00000005194 I 0.844
ENSOARG00000015145 Ovis aries ENSOARG00000015145 I 0.844
ENSONIG00000000007 Oreochromis niloticus ENSONIG00000000007 I 0.844
ENSONIG00000000077 Oreochromis niloticus ENSONIG00000000077 I 0.846
ENSONIG00000010796 Oreochromis niloticus ENSONIG00000010796 I 0.846
ENSP00000228641 Macaca fascicularis ENSP00000228641 I 0.844
ENSP00000228641-D1 Bos grunniens ENSP00000228641-D1 I 0.844
ENSPANG00000007910 Papio anubis ENSPANG00000007910 I 0.844
ENSPFOG00000013532 Poecilia formosa ENSPFOG00000013532 I 0.846
ENSPFOG00000017488 Poecilia formosa ENSPFOG00000017488 I 0.846
ENSPFOG00000017498 Poecilia formosa ENSPFOG00000017498 I 0.844
ENSPPYG00000004799 Pongo abelii ENSPPYG00000004799 I 0.844
ENSPSIG00000012000 Pelodiscus sinensis ENSPSIG00000012000 I 0.846
ENSPSIG00000012468 Pelodiscus sinensis ENSPSIG00000012468 I 0.844
ENSSHAG00000013331 Sarcophilus harrisii ENSSHAG00000013331 I 0.844
ENSSHAG00000013391 Sarcophilus harrisii ENSSHAG00000013391 I 0.846
ENSSTOG00000015808 Ictidomys tridecemlineatus ENSSTOG00000015808 I 0.844
ENSTGUG00000007755 Taeniopygia guttata ENSTGUG00000007755 I 0.846
ENSTSYG00000003275 Tarsius syrichta ENSTSYG00000003275 I 0.844
ENSXMAG00000007430 Xiphophorus maculatus ENSXMAG00000007430 I 0.846
ENSXMAG00000017492 Xiphophorus maculatus ENSXMAG00000017492 I 0.844
ENSXMAG00000017496 Xiphophorus maculatus ENSXMAG00000017496 I 0.846
estExt_fgenesh2_pg.C_2260029 Branchiostoma floridae estExt_fgenesh2_pg.C_2260029 I 0.864
estExt_gwp.C_290160 Branchiostoma floridae estExt_gwp.C_290160 I 0.864
EVEC_0000720901 Enterobius vermicularis EVEC_0000720901 I 0.855
fgenesh2_pg.scaffold_226000031 Branchiostoma floridae fgenesh2_pg.scaffold_226000031 I 0.884
fgenesh2_pg.scaffold_226000032 Branchiostoma floridae fgenesh2_pg.scaffold_226000032 I 0.884
fgenesh2_pg.scaffold_29000123 Branchiostoma floridae fgenesh2_pg.scaffold_29000123 I 0.884
GA10192 Drosophila pseudoobscura FBgn0070251 I 0.884
GB55306 Apis mellifera GB55306 I 0.884
GD18361 Drosophila simulans FBgn0189889 I 0.884
GE23932 Drosophila yakuba FBgn0241076 I 0.884
GF18746 Drosophila ananassae FBgn0095763 I 0.884
Gfo_R003967 Geospiza fortis Gfo_R003967 I 0.844
GG12413 Drosophila erecta FBgn0104701 I 0.884
GH13904 Drosophila grimshawi FBgn0121380 I 0.884
GI24830 Drosophila mojavensis FBgn0147551 I 0.884
GJ24474 Drosophila virilis FBgn0211554 I 0.884
GK22777 Drosophila willistoni FBgn0224749 I 0.884
GL13832 Drosophila persimilis FBgn0151437 I 0.884
GM23547 Drosophila sechellia FBgn0178413 I 0.884
HmN_000553800 Hymenolepis microstoma HmN_000553800 I 0.850
HNAJ_0001324201 Hymenolepis nana HNAJ_0001324201 I 0.850
Hsal_05065--XP_001120527.1_APIME Harpegnathos saltator Hsal_05065--XP_001120527.1_APIME I 0.884
LCUP007809 Lucilia cuprina LCUP007809 I 0.884
LDEC009949 Leptinotarsa decemlineata LDEC009949 I 0.863
LLOJ004446 Lutzomyia longipalpis LLOJ004446 I 0.884
LotgiG99982 Lottia gigantea LotgiG99982 I 0.849
MCOS_0000168001 Mesocestoides corti MCOS_0000168001 I 0.850
myf5 Danio rerio ENSDARG00000007277 I 0.846
MYF5 Ornithorhynchus anatinus ENSOANG00000004853 I 0.846
myf5 Oryzias latipes ENSORLG00000016257 I 0.846
MYF5 Otolemur garnettii ENSOGAG00000001039 I 0.846
MYF5 Gallus gallus ENSGALG00000028091 I 0.846
MYF5 Monodelphis domestica ENSMODG00000020478 I 0.846
MYF6 Macaca mulatta ENSMMUG00000011667 I 0.844
MYF6 Monodelphis domestica ENSMODG00000020477 I 0.844
Myf6 Mus musculus ENSMUSG00000035923 D 0.844
MYF6 Ornithorhynchus anatinus ENSOANG00000004854 I 0.844
myf6 Xenopus tropicalis XB-GENE-998203 I 0.844
MYF6 Anolis carolinensis ENSACAG00000022851 I 0.844
MYF6 Myotis lucifugus ENSMLUG00000004940 I 0.844
MYF6 Microcebus murinus ENSMICG00000004274 I 0.844
MYF6 Bos taurus ENSBTAG00000014003 I 0.844
MYF6 Canis familiaris ENSCAFG00000005805 I 0.844
MYF6 Callithrix jacchus ENSCJAG00000019339 I 0.844
MYF6 Dasypus novemcinctus ENSDNOG00000019387 I 0.844
MYF6 Equus caballus ENSECAG00000018919 I 0.844
MYF6 Felis catus ENSFCAG00000015010 I 0.844
myf6 Gasterosteus aculeatus ENSGACG00000020008 I 0.844
MYF6 Gallus gallus ENSGALG00000010936 I 0.844
MYF6 Gorilla gorilla ENSGGOG00000004369 I 0.844
MYF6 Homo sapiens ENSG00000111046 D 0.844
MYF6 Oryctolagus cuniculus ENSOCUG00000001457 I 0.844
MYF6 Tursiops truncatus ENSTTRG00000014689 I 0.844
Myf6 Rattus norvegicus ENSRNOG00000004878 I 0.844
myf6 Tetraodon nigroviridis ENSTNIG00000011407 I 0.841
myf6 Takifugu rubripes ENSTRUG00000010842 I 0.844
MYF6 Taeniopygia guttata ENSTGUG00000007751 I 0.844
MYF6 Sus scrofa ENSSSCG00000026533 I 0.844
MYF6 Sorex araneus ENSSARG00000008211 I 0.844
MYF6 Pteropus vampyrus ENSPVAG00000003335 I 0.844
MYF6 Procavia capensis ENSPCAG00000001692 I 0.844
MYF6 Vicugna pacos ENSVPAG00000001926 I 0.844
MYF6 Otolemur garnettii ENSOGAG00000001038 I 0.844
myf6 Oryzias latipes ENSORLG00000016261 I 0.844
MYF6 Pan troglodytes ENSPTRG00000005260 I 0.844
MYF6 Loxodonta africana ENSLAFG00000016476 I 0.844
myf6.L Xenopus laevis XB-GENE-6252334 I 0.844
myf6.S Xenopus laevis XB-GENE-998208 I 0.844
myod1 Tetraodon nigroviridis ENSTNIG00000002808 I 0.866
myod1 Gasterosteus aculeatus ENSGACG00000008444 I 0.846
myod1 Gasterosteus aculeatus ENSGACG00000017350 I 0.846
myod1 Oryzias latipes ENSORLG00000000694 I 0.846
Myotis_brandtii_MYF6_10034130 Myotis brandtii Myotis_brandtii_MYF6_10034130 I 0.844
nau Drosophila melanogaster FBgn0002922 D 0.884
nRc.2.0.1.g24248 Romanomermis culicivorax nRc.2.0.1.g24248 I 0.914
NV10294 Nasonia vitripennis NV10294 I 0.884
Ocbimv22002759m.g Octopus bimaculoides Ocbimv22002759m.g I 0.884
PHUM424120 Pediculus humanus PHUM424120 I 0.860
Pvit_10244 Pogona vitticeps Pvit_10244 I 0.844
RPRC009735 Rhodnius prolixus RPRC009735 I 0.914
Sakowv30008488m.g Saccoglossus kowalevskii Sakowv30008488m.g I 0.890
SBAD_0001285401 Soboliphyme baturini SBAD_0001285401 I 0.914
Sjc_0011830 Schistosoma japonicum Sjc_0011830 I 0.871
Smp_167400 Schistosoma mansoni Smp_167400 I 0.901
SMU15001149 Schmidtea mediterranea SMU15001149 I 0.871
SMUV_0000995901 Syphacia muris SMUV_0000995901 I 0.855
SPER_0001779001 Spirometra erinaceieuropaei SPER_0001779001 I 0.850
SPER_0002215301 Spirometra erinaceieuropaei SPER_0002215301 I 0.850
SPU_021119 Strongylocentrotus purpuratus SPU_021119 I 0.914
SSLN_0000613901 Schistocephalus solidus SSLN_0000613901 I 0.850
T265_10140 Opisthorchis viverrini T265_10140 I 0.901
TASK_0000583801 Taenia asiatica TASK_0000583801 I 0.850
TC015855 Tribolium castaneum TC015855 I 0.863
TMUE_s0045001800 Trichuris muris TMUE_s0045001800 I 0.914
TRE_0000306101 Trichobilharzia regenti TRE_0000306101 I 0.901
TsM_000079400 Taenia solium TsM_000079400 I 0.850
TTRE_0000002701 Trichuris trichiura TTRE_0000002701 I 0.914
YQE_11476 Dendroctonus ponderosae YQE_11476 I 0.863