ENSAMEG00000006374 (Ailuropoda melanoleuca)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSAMEG00000006374 T032784_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PTF1A
M04156_2.00
Homo sapiens
AACAGCTGACRB

VYGTCAGCTGTT
SELEX
Yin et al.(2017)
PTF1A_eDBD_HT-SELEX
0.914 1.000
PTF1A
M08736_2.00
Homo sapiens
SCAGCTGBYNBNNYYYHN

NDRRRNNVNRVCAGCTGS
Misc
Kulakovskiy et al.(2013)
PTF1A_HUMAN.H11MO.0.B
0.914 1.000
Ptf1a
M08757_2.00
Mus musculus
SCAGCTGBYNBNNYYYHN

NDRRRNNVNRVCAGCTGS
Misc
Kulakovskiy et al.(2013)
PTF1A_MOUSE.H11MO.0.A
0.914 1.000
Ptf1a
M09470_2.00
Mus musculus
NVVCASSTGB

VCASSTGBBN
Misc
Heinz et al.(2010)
Panc1-Ptf1a_GSE47459
0.914 1.000
PTF1A
M04157_2.00
Homo sapiens
AMCAGCTGACRB

VYGTCAGCTGKT
SELEX
Yin et al.(2017)
PTF1A_eDBD_Methyl-HT-SELEX
0.914 1.000
Fer1
M03620_2.00
Drosophila melanogaster
VDCASCTGHY

RDCAGSTGHB
SELEX
Nitta et al.(2015)
Fer1_1
0.894 0.865
Fer1
M05990_2.00
Drosophila melanogaster
HVCASMTGWCV

BGWCAKSTGBD
B1H
Zhu et al.(2011)
Fer1_da_SANGER_10_FBgn0037475
0.894 0.865
Fer1
M05991_2.00
Drosophila melanogaster
WYRHCAGCTGACG

CGTCAGCTGDYRW
B1H
Zhu et al.(2011)
Fer1_SANGER_5_FBgn0037475
0.894 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMEP00000006704 bHLH 47 99
ENSAMEP00000006712 bHLH 70 122

Links

Other bHLH family TFs
Other Ailuropoda melanoleuca TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29609.m000587 Ricinus communis 29609.m000587 N 0.000
AMTR_s00021p00221770 Amborella trichopoda AMTR_s00021p00221770 N 0.000
ARF1 Arabidopsis thaliana AT1G59750 N 0.000
ARF1 Arabidopsis lyrata fgenesh2_kg.2__468__AT1G59750.1 N 0.000
ARF7 Oryza sativa OS02G0557200 N 0.000
BGIOSGA008429 Oryza indica BGIOSGA008429 N 0.000
Bo1g090350 Brassica oleracea Bo1g090350 N 0.000
Bo4g083590 Brassica oleracea Bo4g083590 N 0.000
Bostr.10040s0256 Boechera stricta Bostr.10040s0256 N 0.000
Bra035427 Brassica rapa Bra035427 N 0.000
Cagra.0996s0001 Capsella grandiflora Cagra.0996s0001 N 0.000
Carubv10022415m.g Capsella rubella Carubv10022415m.g N 0.000
cassava11453.m1 Manihot esculenta cassava11453.m1 N 0.000
cassava11454.m1 Manihot esculenta cassava11454.m1 N 0.000
cassava11455.m1 Manihot esculenta cassava11455.m1 N 0.000
cassava11456.m1 Manihot esculenta cassava11456.m1 N 0.000
cassava7098.valid.m1 Manihot esculenta cassava7098.valid.m1 N 0.000
cassava7099.valid.m1 Manihot esculenta cassava7099.valid.m1 N 0.000
Ciclev10000491m.g Citrus clementina Ciclev10000491m.g N 0.000
Cla001927 Citrullus lanatus Cla001927 N 0.000
Cucsa.183410 Cucumis sativus Cucsa.183410 N 0.000
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.000
GLYMA07G40270 Glycine max GLYMA07G40270 N 0.000
GLYMA12G28550 Glycine max GLYMA12G28550 N 0.000
Gorai.011G091100 Gossypium raimondii Gorai.011G091100 N 0.000
GSMUA_Achr6G16450_001 Musa acuminata GSMUA_Achr6G16450_001 N 0.000
Lus10007440.g Linum usitatissimum Lus10007440.g N 0.000
Lus10024455.g Linum usitatissimum Lus10024455.g N 0.000
mgf006427m Mimulus guttatus mgf006427m N 0.000
OBART02G20600 Oryza barthii OBART02G20600 N 0.000
OGLUM02G20880 Oryza glumaepatula OGLUM02G20880 N 0.000
OLONG_012362 Oryza longistaminata OLONG_012362 N 0.000
OMERI02G20310 Oryza meridionalis OMERI02G20310 N 0.000
ONIVA02G22590 Oryza nivara ONIVA02G22590 N 0.000
OPUNC02G18520 Oryza punctata OPUNC02G18520 N 0.000
ORGLA02G0176700 Oryza glaberrima ORGLA02G0176700 N 0.000
ORUFI02G21640 Oryza rufipogon ORUFI02G21640 N 0.000
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.000
POPTR_0003s00890 Populus trichocarpa POPTR_0003s00890 N 0.000
PRUPE_ppa002394mg Prunus persica PRUPE_ppa002394mg N 0.000
SapurV1A.0225s0120 Salix purpurea SapurV1A.0225s0120 N 0.000
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.000
Sb04g022830 Sorghum bicolor Sb04g022830 N 0.000
Solyc01g103050.2 Solanum lycopersicum Solyc01g103050.2 N 0.000
TCM_027113 Theobroma cacao TCM_027113 I 0.000
Thhalv10023326m.g Eutrema salsugineum Thhalv10023326m.g N 0.000
Traes_2AL_89543BA1A Triticum aestivum Traes_2AL_89543BA1A N 0.000
Traes_2DL_A86E54838 Triticum aestivum Traes_2DL_A86E54838 N 0.000
TRIUR3_33501 Triticum urartu TRIUR3_33501 N 0.000
VIT_18s0089g00910 Vitis vinifera VIT_18s0089g00910 N 0.000