ENSAMXG00000006548 (Astyanax mexicanus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSAMXG00000006548 T032875_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tcf3
M09465_2.00
Mus musculus
ABWTCAAAGS

SCTTTGAWVT
Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724
0.914 0.942
Tcf3
M09466_2.00
Mus musculus
VCAGCTGBNN

NNVCAGCTGB
Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978
0.914 0.942
Tcf3
M09886_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E47_05
0.914 0.942
TCF3
M02775_2.00
Homo sapiens
NVCACCTGBN

NVCAGGTGBN
SELEX
Jolma et al.(2013)
TCF3_1
0.886 0.942
TCF3
M08710_2.00
Homo sapiens
VVCASCTGCHN

NDGCAGSTGBB
Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A
0.886 0.942
TCF3
M09791_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E12_Q6
0.886 0.942
TCF3
M09792_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_01
0.886 0.942
TCF3
M09793_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_02
0.886 0.942
TCF3
M09794_2.00
Homo sapiens
VVVVMCACCTGCNBB

VVNGCAGGTGKBBBB
Transfac
Matys et al.(2006)
V$E47_01
0.886 0.942
TCF3
M09795_2.00
Homo sapiens
NNKWRCACCTGYDNNN

NNNHRCAGGTGYWMNN
Transfac
Matys et al.(2006)
V$E47_02
0.886 0.942
Tcf12
M01740_2.00
Mus musculus
NVCAYCTGB

VCAGRTGBN
PBM
Weirauch et al.(2014)
pTH5071
0.886 0.904
TCF12
M04137_2.00
Homo sapiens
VCACSTGB

VCASGTGB
SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX
0.886 0.904
Tcf12
M08062_2.00
Mus musculus
RRCAGCTGNNN

NNNCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0521.1
0.886 0.904
TCF12
M07805_2.00
Homo sapiens
NVDSCAGSTGB

VCASCTGSHBN
ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha
0.886 0.904
TCF12
M07806_2.00
Homo sapiens
VCASCTGB

VCAGSTGB
ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha
0.886 0.904
TCF12
M08731_2.00
Homo sapiens
CMCASCTGSH

DSCAGSTGKG
Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A
0.886 0.904
Tcf12
M08762_2.00
Mus musculus
VMCASCTGSH

DSCAGSTGKB
Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A
0.886 0.904
TCF12
M09458_2.00
Homo sapiens
NNVCAGCTGB

VCAGCTGBNN
Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465
0.886 0.904
TCF12
M09858_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HEB_Q6
0.886 0.904
TCF12
M09859_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HTF4_Q2
0.886 0.904
TCF12
M09860_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_01
0.886 0.904
TCF12
M09861_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_03
0.886 0.904
TCF12
M09862_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_05
0.886 0.904
TCF12
M04138_2.00
Homo sapiens
NCAYCTGN

NCAGRTGN
SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX
0.886 0.904
Tcf3
M00753_2.00
Mus musculus
VCACCTGBN

NVCAGGTGB
PBM
Weirauch et al.(2013)
pTH3866
0.886 0.827
Tcf3
M01723_2.00
Mus musculus
NNVCACSTGB

VCASGTGBNN
PBM
Weirauch et al.(2014)
pTH4580
0.886 0.827
Tcf3
M00118_2.00
Mus musculus
VCAYCTGB

VCAGRTGB
PBM
Badis et al.(2009)
Tcfe2a_3865
0.886 0.827
Tcf4
M01750_2.00
Mus musculus
VCAGVTGBN

NVCABCTGB
PBM
Weirauch et al.(2014)
pTH5101
0.884 0.865
TCF4
M02807_2.00
Homo sapiens
HRCACCTGBN

NVCAGGTGYD
SELEX
Jolma et al.(2013)
TCF4_1
0.884 0.865
TCF4
M02808_2.00
Homo sapiens
NVCACCTBBN

NVVAGGTGBN
SELEX
Jolma et al.(2013)
TCF4_2
0.884 0.865
TCF4
M02728_2.00
Homo sapiens
RCACCTG

CAGGTGY
SELEX
Jolma et al.(2010)
TCF4_dimer
0.884 0.865
TCF4
M04214_2.00
Homo sapiens
VCACCTGB

VCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX
0.884 0.865
Tcf4
M08775_2.00
Mus musculus
HRCACCTGB

VCAGGTGYD
Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B
0.884 0.865
TCF4
M09461_2.00
Homo sapiens
ASWTCAAAGRVN

NBYCTTTGAWST
Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054
0.884 0.865
TCF4
M04215_2.00
Homo sapiens
VCACCTGN

NCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX
0.884 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000006715 bHLH 527 580

Links

Other bHLH family TFs
Other Astyanax mexicanus TFs

204 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
gw.78.158.1 Branchiostoma floridae gw.78.158.1 N 0.000
TCF23 Sus scrofa ENSSSCG00000027409 N 0.000
ENSSHAG00000012462 Sarcophilus harrisii ENSSHAG00000012462 N 0.000
Tcf24 Rattus norvegicus ENSRNOG00000052668 N 0.000
Tcf23 Rattus norvegicus ENSRNOG00000025736 N 0.000
ENSPVAG00000015152 Pteropus vampyrus ENSPVAG00000015152 N 0.000
ENSPSIG00000014305 Pelodiscus sinensis ENSPSIG00000014305 N 0.000
ENSPFOG00000004192 Poecilia formosa ENSPFOG00000004192 N 0.000
ENSPANG00000017721 Papio anubis ENSPANG00000017721 N 0.000
ENSOPRG00000010556 Ochotona princeps ENSOPRG00000010556 N 0.000
ENSOCUG00000008655 Oryctolagus cuniculus ENSOCUG00000008655 N 0.000
ENSOARG00000019168 Ovis aries ENSOARG00000019168 N 0.000
ENSOARG00000000076 Ovis aries ENSOARG00000000076 N 0.000
ENSSTOG00000007256 Ictidomys tridecemlineatus ENSSTOG00000007256 N 0.000
ENSSTOG00000015523 Ictidomys tridecemlineatus ENSSTOG00000015523 N 0.000
e_gw.78.157.1 Branchiostoma floridae e_gw.78.157.1 N 0.000
e_gw.78.156.1 Branchiostoma floridae e_gw.78.156.1 N 0.000
Pvit_15007 Pogona vitticeps Pvit_15007 N 0.000
Gfo_R001999 Geospiza fortis Gfo_R001999 N 0.000
ENSP00000296096-D1 Bos grunniens ENSP00000296096-D1 N 0.000
Cmyd_10002847 Chelonia mydas Cmyd_10002847 N 0.000
Alligator_sinensis_CCG001228.1 Alligator sinensis Alligator_sinensis_CCG001228.1 N 0.000
SPU_016445 Strongylocentrotus purpuratus SPU_016445 N 0.000
LotgiG70568 Lottia gigantea LotgiG70568 N 0.000
TCF24 Tursiops truncatus ENSTTRG00000017150 N 0.000
TCF23 Tursiops truncatus ENSTTRG00000005255 N 0.000
TCF24 Takifugu rubripes ENSTRUG00000009376 N 0.000
TCF23 Ornithorhynchus anatinus ENSOANG00000003936 N 0.000
TCF24 Ornithorhynchus anatinus ENSOANG00000002317 N 0.000
ENSNLEG00000010898 Nomascus leucogenys ENSNLEG00000010898 N 0.000
TCF24 Dasypus novemcinctus ENSDNOG00000045736 N 0.000
TCF24 Danio rerio ENSDARG00000086944 N 0.000
ENSCSAG00000014111 Chlorocebus sabaeus ENSCSAG00000014111 N 0.000
TCF24 Cavia porcellus ENSCPOG00000014534 N 0.000
ENSCPOG00000003785 Cavia porcellus ENSCPOG00000003785 N 0.000
TCF23 Callithrix jacchus ENSCJAG00000001198 N 0.000
TCF23 Canis familiaris ENSCAFG00000030192 N 0.000
TCF24 Canis familiaris ENSCAFG00000029615 N 0.000
TCF23 Bos taurus ENSBTAG00000014813 N 0.000
ENSAMXG00000013680 Astyanax mexicanus ENSAMXG00000013680 N 0.000
ENSAMEG00000012533 Ailuropoda melanoleuca ENSAMEG00000012533 N 0.000
ENSAMEG00000001827 Ailuropoda melanoleuca ENSAMEG00000001827 N 0.000
Tcf23 Dipodomys ordii ENSDORG00000014403 N 0.000
TCF23 Equus caballus ENSECAG00000021374 N 0.000
Tcf24 Mus musculus ENSMUSG00000099032 N 0.000
Tcf23 Mus musculus ENSMUSG00000006642 N 0.000
ENSMODG00000024958 Monodelphis domestica ENSMODG00000024958 N 0.000
TCF23 Monodelphis domestica ENSMODG00000015714 N 0.000
ENSMEUG00000010665 Macropus eugenii ENSMEUG00000010665 N 0.000
ENSLOCG00000004611 Lepisosteus oculatus ENSLOCG00000004611 N 0.000
TCF23 Loxodonta africana ENSLAFG00000014587 N 0.000
ENSLACG00000014458 Latimeria chalumnae ENSLACG00000014458 N 0.000
ENSLACG00000004204 Latimeria chalumnae ENSLACG00000004204 N 0.000
TCF24 Gorilla gorilla ENSGGOG00000027653 N 0.000
ENSGACG00000002911 Gasterosteus aculeatus ENSGACG00000002911 N 0.000
TCF24 Homo sapiens ENSG00000261787 N 0.000
TCF24 Anolis carolinensis ENSACAG00000016461 N 0.000