PTF1A (Canis familiaris)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSCAFG00000004216 T033154_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PTF1A
M04156_2.00 		Homo sapiens
AACAGCTGACRB
VYGTCAGCTGTT		 SELEX
Yin et al.(2017)
PTF1A_eDBD_HT-SELEX 		0.826 1.000
PTF1A
M08736_2.00 		Homo sapiens
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS		 Misc
Kulakovskiy et al.(2013)
PTF1A_HUMAN.H11MO.0.B 		0.826 1.000
Ptf1a
M08757_2.00 		Mus musculus
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS		 Misc
Kulakovskiy et al.(2013)
PTF1A_MOUSE.H11MO.0.A 		0.826 1.000
Ptf1a
M09470_2.00 		Mus musculus
NVVCASSTGB
VCASSTGBBN		 Misc
Heinz et al.(2010)
Panc1-Ptf1a_GSE47459 		0.826 1.000
PTF1A
M04157_2.00 		Homo sapiens
AMCAGCTGACRB
VYGTCAGCTGKT		 SELEX
Yin et al.(2017)
PTF1A_eDBD_Methyl-HT-SELEX 		0.826 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000006259 bHLH 135 174

Links

Other bHLH family TFs
Other Canis familiaris TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPFOG00000002486 Poecilia formosa ENSPFOG00000002486 I 0.826
ptf1a Takifugu rubripes ENSTRUG00000007713 I 0.826
ENSXMAG00000015151 Xiphophorus maculatus ENSXMAG00000015151 I 0.826
ptf1a Oryzias latipes ENSORLG00000008277 I 0.826
ENSONIG00000016978 Oreochromis niloticus ENSONIG00000016978 I 0.826
ptf1a Danio rerio ENSDARG00000014479 I 0.826
ENSGMOG00000016849 Gadus morhua ENSGMOG00000016849 I 0.826
ENSLOCG00000003186 Lepisosteus oculatus ENSLOCG00000003186 I 0.826
ENSAMXG00000008222 Astyanax mexicanus ENSAMXG00000008222 I 0.826