ENSCING00000004702 (Ciona intestinalis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSCING00000004702 T033260_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFE3
M02773_2.00 		Homo sapiens
VNCACGTGMY
RKCACGTGNB		 SELEX
Jolma et al.(2013)
TFE3_1 		0.861 0.815
TFE3
M04058_2.00 		Homo sapiens
YVCACGTGAYN
NRTCACGTGBR		 SELEX
Yin et al.(2017)
TFE3_eDBD_HT-SELEX 		0.861 0.815
TFE3
M08709_2.00 		Homo sapiens
TCACGTGACH
DGTCACGTGA		 Misc
Kulakovskiy et al.(2013)
TFE3_HUMAN.H11MO.0.B 		0.861 0.815
TFE3
M09790_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TFEA_Q6 		0.861 0.815
TFE3
M04059_2.00 		Homo sapiens
NRTCACATGBB
VVCATGTGAYN		 SELEX
Yin et al.(2017)
TFE3_eDBD_Methyl-HT-SELEX 		0.861 0.815
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCINP00000009728 bHLH 155 208

Links

Other bHLH family TFs
Other Ciona intestinalis TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCSAVG00000010462 Ciona savignyi ENSCSAVG00000010462 I 0.914
TFE3 Procavia capensis ENSPCAG00000003945 I 0.861
ENSPFOG00000001499 Poecilia formosa ENSPFOG00000001499 I 0.861
ENSPMAG00000008619 Petromyzon marinus ENSPMAG00000008619 I 0.861
ENSPPYG00000029376 Pongo abelii ENSPPYG00000029376 I 0.861
ENSPANG00000013676 Papio anubis ENSPANG00000013676 I 0.861
tfe3b Oryzias latipes ENSORLG00000014134 I 0.861
ENSONIG00000000820 Oreochromis niloticus ENSONIG00000000820 I 0.861
ENSONIG00000020291 Oreochromis niloticus ENSONIG00000020291 I 0.861
TFE3 Ochotona princeps ENSOPRG00000007735 I 0.861
TFE3 Pteropus vampyrus ENSPVAG00000009435 I 0.861
TFE3 Sorex araneus ENSSARG00000000644 I 0.861
ENSP00000338360-D1 Bos grunniens ENSP00000338360-D1 I 0.861
Myotis_brandtii_TFE3_10010865 Myotis brandtii Myotis_brandtii_TFE3_10010865 I 0.861
tfe3.S Xenopus laevis XB-GENE-5918226 I 0.861
ENSMMUP00000030934 Macaca fascicularis ENSMMUP00000030934 I 0.861
ENSXMAG00000003547 Xiphophorus maculatus ENSXMAG00000003547 I 0.861
TFE3 Sus scrofa ENSSSCG00000012287 I 0.861
tfe3a Takifugu rubripes ENSTRUG00000005584 I 0.861
TFE3 Tursiops truncatus ENSTTRG00000009064 I 0.861
TFE3 Otolemur garnettii ENSOGAG00000031330 I 0.861
TFE3 Oryctolagus cuniculus ENSOCUG00000015807 I 0.861
TFE3 Equus caballus ENSECAG00000020642 I 0.861
TFE3 Felis catus ENSFCAG00000002574 I 0.861
TFE3 Homo sapiens ENSG00000068323 D 0.861
TFE3 Dasypus novemcinctus ENSDNOG00000039173 I 0.861
tfe3a Danio rerio ENSDARG00000098903 I 0.861
TFE3 Bos taurus ENSBTAG00000008523 I 0.861
TFE3 Canis familiaris ENSCAFG00000015765 I 0.861
ENSCSAG00000013021 Chlorocebus sabaeus ENSCSAG00000013021 I 0.861
TFE3 Gorilla gorilla ENSGGOG00000014023 I 0.861
ENSGMOG00000018115 Gadus morhua ENSGMOG00000018115 I 0.861
TFE3 Macaca mulatta ENSMMUG00000023494 I 0.861
ENSMPUG00000013794 Mustela putorius furo ENSMPUG00000013794 I 0.861
ENSNLEG00000007963 Nomascus leucogenys ENSNLEG00000007963 I 0.861
ENSOARG00000011157 Ovis aries ENSOARG00000011157 I 0.861
TFE3 Myotis lucifugus ENSMLUG00000030217 I 0.861
TFE3 Microcebus murinus ENSMICG00000009708 I 0.861
TFE3 Loxodonta africana ENSLAFG00000025585 I 0.861
ENSLOCG00000014691 Lepisosteus oculatus ENSLOCG00000014691 I 0.861
ENSAMEG00000012353 Ailuropoda melanoleuca ENSAMEG00000012353 I 0.861
ENSSHAG00000003327 Sarcophilus harrisii ENSSHAG00000003327 I 0.848