her12 (Danio rerio)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSDARG00000032963 T033671_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within Notch signaling pathway; brain development; and somitogenesis. Predicted to be active in nucleus. Is expressed in several structures, including mesoderm; nervous system; neural plate; tail bud; and trunk vasculature. Orthologous to human HES5 (hes family bHLH transcription factor 5). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000044079 bHLH 23 77
ENSDARP00000099379 bHLH 23 77

Links

Other bHLH family TFs
Other Danio rerio TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
her15.1 Danio rerio ENSDARG00000054560 N 0.851
her15.1 Danio rerio ENSDARG00000054562 N 0.851
Cmyd_10015932 Chelonia mydas Cmyd_10015932 N 0.841
Alligator_sinensis_CCG011593.1 Alligator sinensis Alligator_sinensis_CCG011593.1 N 0.841
Afo_R003312 Aptenodytes forsteri Afo_R003312 N 0.841
Gfo_R009738 Geospiza fortis Gfo_R009738 N 0.841
Tal_R007853 Tyto alba Tal_R007853 N 0.841
Tal_R007854 Tyto alba Tal_R007854 N 0.841
Aan_R005911 Calypte anna Aan_R005911 N 0.841
Pvit_15591 Pogona vitticeps Pvit_15591 N 0.841
Gfo_R009739 Geospiza fortis Gfo_R009739 N 0.841
ENSSHAG00000014651 Sarcophilus harrisii ENSSHAG00000014651 N 0.841
ENSMEUG00000001942 Macropus eugenii ENSMEUG00000001942 N 0.841
ENSGALG00000001136 Gallus gallus ENSGALG00000001136 N 0.841
ENSFALG00000009565 Ficedula albicollis ENSFALG00000009565 N 0.841
ENSMGAG00000001983 Meleagris gallopavo ENSMGAG00000001983 N 0.841
ENSMODG00000008220 Monodelphis domestica ENSMODG00000008220 N 0.841
ENSTGUG00000002875 Taeniopygia guttata ENSTGUG00000002875 N 0.841
ENSAPLG00000007688 Anas platyrhynchos ENSAPLG00000007688 N 0.841
ENSPSIG00000004060 Pelodiscus sinensis ENSPSIG00000004060 N 0.841
ENSTGUG00000016560 Taeniopygia guttata ENSTGUG00000016560 N 0.841