atoh1c (Danio rerio)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSDARG00000039602 T033682_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within cerebellar granule cell differentiation. Predicted to be active in nucleus. Is expressed in brain; midbrain hindbrain boundary neural rod; and midbrain hindbrain boundary neural tube. Orthologous to human ATOH1 (atonal bHLH transcription factor 1). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000057865 bHLH 65 124
ENSDARP00000129370 bHLH 72 124

Links

Other bHLH family TFs
Other Danio rerio TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000025101 Astyanax mexicanus ENSAMXG00000025101 N 0.914
ENSGACG00000014308 Gasterosteus aculeatus ENSGACG00000014308 N 0.889
ENSXMAG00000020305 Xiphophorus maculatus ENSXMAG00000020305 N 0.865
ENSPFOG00000020168 Poecilia formosa ENSPFOG00000020168 N 0.865