atoh1a (Danio rerio)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSDARG00000055294 T033701_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Atoh1
M01754_2.00
Mus musculus
NMCATATGKN

NMCATATGKN
PBM
Weirauch et al.(2014)
pTH5074
0.884 0.904
Atoh1
M02820_2.00
Mus musculus
RMCATATGBY

RVCATATGKY
SELEX
Jolma et al.(2013)
Atoh1_1
0.884 0.904
ATOH1
M04166_2.00
Homo sapiens
RACAGCTGYY

RRCAGCTGTY
SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_1
0.884 0.904
ATOH1
M04167_2.00
Homo sapiens
RVCATATGBY

RVCATATGBY
SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_2
0.884 0.904
ATOH1
M08738_2.00
Homo sapiens
RRCAGMTGG

CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
ATOH1_HUMAN.H11MO.0.B
0.884 0.904
Atoh1
M08779_2.00
Mus musculus
RRCAGMTGG

CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
ATOH1_MOUSE.H11MO.0.B
0.884 0.904
Atoh1
M09480_2.00
Mus musculus
NNRVCAKMTGBY

RVCAKMTGBYNN
Misc
Heinz et al.(2010)
Cerebellum-Atoh1_GSE22111
0.884 0.904
ATOH1
M09877_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MATH1_Q2
0.884 0.904
ATOH1
M04168_2.00
Homo sapiens
AACAGCTGTY

RACAGCTGTT
SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_1
0.884 0.904
ATOH1
M04169_2.00
Homo sapiens
AVCATATGBY

RVCATATGBT
SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_2
0.884 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000105581 bHLH 119 171

Links

Other bHLH family TFs
Other Danio rerio TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSLOCG00000017552 Lepisosteus oculatus ENSLOCG00000017552 I 0.914
atoh1a Tetraodon nigroviridis ENSTNIG00000017584 I 0.890
ENSPFOG00000019101 Poecilia formosa ENSPFOG00000019101 I 0.890
atoh1a Takifugu rubripes ENSTRUG00000012647 I 0.890
ENSXMAG00000015349 Xiphophorus maculatus ENSXMAG00000015349 I 0.890
ENSONIG00000015058 Oreochromis niloticus ENSONIG00000015058 I 0.890
atoh1a Oryzias latipes ENSORLG00000004876 I 0.890
ATOH1 Otolemur garnettii ENSOGAG00000030783 I 0.884
ENSPPYG00000015283 Pongo abelii ENSPPYG00000015283 I 0.884
ENSPANG00000000252 Papio anubis ENSPANG00000000252 I 0.884
ATOH1 Ochotona princeps ENSOPRG00000008973 I 0.884
ATOH1 Pan troglodytes ENSPTRG00000031141 I 0.884
ATOH1 Sus scrofa ENSSSCG00000009196 I 0.884
ENSP00000302216 Macaca fascicularis ENSP00000302216 I 0.884
Myotis_brandtii_ATOH1_10005345 Myotis brandtii Myotis_brandtii_ATOH1_10005345 I 0.884
XP_002937284 Xenopus tropicalis XP_002937284 I 0.884
ENSBTAP00000003762-D1 Bos grunniens ENSBTAP00000003762-D1 I 0.884
ATOH1 Tupaia belangeri ENSTBEG00000003291 I 0.884
ENSSHAG00000009094 Sarcophilus harrisii ENSSHAG00000009094 I 0.884
ATOH1 Oryctolagus cuniculus ENSOCUG00000013154 I 0.884
ENSSTOG00000009183 Ictidomys tridecemlineatus ENSSTOG00000009183 I 0.884
Atoh1 Rattus norvegicus ENSRNOG00000006383 I 0.884
Atoh1 Mus musculus ENSMUSG00000073043 D 0.884
ATOH1 Callithrix jacchus ENSCJAG00000022028 I 0.884
ATOH1 Gorilla gorilla ENSGGOG00000001096 I 0.884
ENSNLEG00000018621 Nomascus leucogenys ENSNLEG00000018621 I 0.884
ATOH1 Homo sapiens ENSG00000172238 D 0.884
ATOH1 Echinops telfairi ENSETEG00000019807 I 0.884
ATOH1 Dasypus novemcinctus ENSDNOG00000018799 I 0.884
ATOH1 Equus caballus ENSECAG00000001213 I 0.884
ATOH1 Choloepus hoffmanni ENSCHOG00000000748 I 0.884
ATOH1 Canis familiaris ENSCAFG00000010016 I 0.884
ATOH1 Monodelphis domestica ENSMODG00000019270 I 0.884
ENSMPUG00000019092 Mustela putorius furo ENSMPUG00000019092 I 0.884
ATOH1 Bos taurus ENSBTAG00000002895 I 0.884
ATOH1 Macaca mulatta ENSMMUG00000002367 I 0.884
ATOH1 Myotis lucifugus ENSMLUG00000008044 I 0.884
ENSLAFG00000023246 Loxodonta africana ENSLAFG00000023246 I 0.884
ENSMEUG00000009664 Macropus eugenii ENSMEUG00000009664 I 0.884
ENSCSAG00000000408 Chlorocebus sabaeus ENSCSAG00000000408 I 0.884
ENSGMOG00000019019 Gadus morhua ENSGMOG00000019019 I 0.870
ENSLACG00000005491 Latimeria chalumnae ENSLACG00000005491 I 0.860
atoh1a Gasterosteus aculeatus ENSGACG00000007342 N 0.844
ENSLACG00000013212 Latimeria chalumnae ENSLACG00000013212 I 0.838