atoh1a (Danio rerio)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSDARG00000055294 T033701_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Atoh1
M01754_2.00
Mus musculus
NMCATATGKN

NMCATATGKN
PBM
Weirauch et al.(2014)
pTH5074
0.884 0.904
Atoh1
M02820_2.00
Mus musculus
RMCATATGBY

RVCATATGKY
SELEX
Jolma et al.(2013)
Atoh1_1
0.884 0.904
ATOH1
M04166_2.00
Homo sapiens
RACAGCTGYY

RRCAGCTGTY
SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_1
0.884 0.904
ATOH1
M04167_2.00
Homo sapiens
RVCATATGBY

RVCATATGBY
SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_2
0.884 0.904
ATOH1
M08738_2.00
Homo sapiens
RRCAGMTGG

CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
ATOH1_HUMAN.H11MO.0.B
0.884 0.904
Atoh1
M08779_2.00
Mus musculus
RRCAGMTGG

CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
ATOH1_MOUSE.H11MO.0.B
0.884 0.904
Atoh1
M09480_2.00
Mus musculus
NNRVCAKMTGBY

RVCAKMTGBYNN
Misc
Heinz et al.(2010)
Cerebellum-Atoh1_GSE22111
0.884 0.904
ATOH1
M09877_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MATH1_Q2
0.884 0.904
ATOH1
M04168_2.00
Homo sapiens
AACAGCTGTY

RACAGCTGTT
SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_1
0.884 0.904
ATOH1
M04169_2.00
Homo sapiens
AVCATATGBY

RVCATATGBT
SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_2
0.884 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000105581 bHLH 119 171

Links

Other bHLH family TFs
Other Danio rerio TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
20730_YOR337W Saccharomyces mikatae 20730_YOR337W I 0.000
21533_YOR337W Saccharomyces paradoxus 21533_YOR337W I 0.000
24278_YOR337W Saccharomyces bayanus 24278_YOR337W I 0.000
AACERI_AaceriADR365W Saccharomycetaceae sp ashbya aceri AACERI_AaceriADR365W I 0.000
AGOS_ADR365W Ashbya gossypii AGOS_ADR365W I 0.000
Kpol_1071p10 Vanderwaltozyma polyspora Kpol_1071p10 I 0.000
LALA0_S14e00452g Lachancea lanzarotensis LALA0_S14e00452g I 0.000
NDAI_0E03850 Naumovozyma dairenensis NDAI_0E03850 I 0.000
SAKL0B10538g Lachancea kluyveri SAKL0B10538g I 0.000
SKUD_200506 Saccharomyces kudriavzevii SKUD_200506 I 0.000
TDEL_0H03950 Torulaspora delbrueckii TDEL_0H03950 I 0.000
TEA1 Saccharomyces cerevisiae YOR337W D 0.000
ZBAI_04921 Zygosaccharomyces bailii ZBAI_04921 I 0.000
ZBAI_06816 Zygosaccharomyces bailii ZBAI_06816 I 0.000
ZYRO0D04422g Zygosaccharomyces rouxii ZYRO0D04422g I 0.000