myog (Gasterosteus aculeatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSGACG00000000349 T034351_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYOG
M04098_2.00
Homo sapiens
BRACAGCTGWCR

YGWCAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_1
0.884 0.942
MYOG
M04099_2.00
Homo sapiens
NAACAGCTGTYN

NRACAGCTGTTN
SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_2
0.884 0.942
MYOG
M04102_2.00
Homo sapiens
NRACARCTGWCR

YGWCAGYTGTYN
SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_1
0.884 0.942
MYOG
M04103_2.00
Homo sapiens
NAACARYTGTYN

NRACARYTGTTN
SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_2
0.884 0.942
Myog
M08061_2.00
Mus musculus
RRCAGCTGVNN

NNBCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0500.1
0.884 0.942
MYOG
M08721_2.00
Homo sapiens
BHVCAGCTGYYNB

VNRRCAGCTGBDV
Misc
Kulakovskiy et al.(2013)
MYOG_HUMAN.H11MO.0.B
0.884 0.942
Myog
M08755_2.00
Mus musculus
BHVCAGCTGYYNB

VNRRCAGCTGBDV
Misc
Kulakovskiy et al.(2013)
MYOG_MOUSE.H11MO.0.A
0.884 0.942
Myog
M09469_2.00
Mus musculus
RACAGCTG

CAGCTGTY
Misc
Heinz et al.(2010)
C2C12-MyoG_GSE36024
0.884 0.942
MYOG
M09829_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOGENIN_Q6_01
0.884 0.942
MYOG
M09830_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOGENIN_Q6
0.884 0.942
MYOG
M04100_2.00
Homo sapiens
BRACAGCTGTCR

YGACAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_1
0.884 0.942
MYOG
M04101_2.00
Homo sapiens
BAACAGCTGTYV

BRACAGCTGTTV
SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_2
0.884 0.942
MYOG
M04104_2.00
Homo sapiens
BRACAGCTGTCR

YGACAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_1
0.884 0.942
MYOG
M04105_2.00
Homo sapiens
NAACAGCTGTYN

NRACAGCTGTTN
SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_2
0.884 0.942
Myf6
M00120_2.00
Mus musculus
NCRNNTGNY

RNCANNYGN
PBM
Badis et al.(2009)
Myf6_3824
0.883 0.827
Myf6
M01742_2.00
Mus musculus
RACAGHTGH

DCADCTGTY
PBM
Weirauch et al.(2014)
pTH5099
0.883 0.827
MYF6
M02780_2.00
Homo sapiens
AACARCTGTY

RACAGYTGTT
SELEX
Jolma et al.(2013)
MYF6_1
0.883 0.827
MYF6
M04084_2.00
Homo sapiens
BRHCASSTGWCR

YGWCASSTGDYV
SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_1
0.883 0.827
MYF6
M04085_2.00
Homo sapiens
NRACASSTGWYV

BRWCASSTGTYN
SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_2
0.883 0.827
MYF6
M05831_2.00
Homo sapiens
BRACAKNTGNY

RNCANMTGTYV
SMiLE-seq
Isakova et al.(2017)
MYF6
0.883 0.827
MYF6
M08717_2.00
Homo sapiens
CASCTGC

GCAGSTG
Misc
Kulakovskiy et al.(2013)
MYF6_HUMAN.H11MO.0.C
0.883 0.827
Myf6
M08767_2.00
Mus musculus
CASCTGC

GCAGSTG
Misc
Kulakovskiy et al.(2013)
MYF6_MOUSE.H11MO.0.C
0.883 0.827
MYF6
M09820_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MRF4_Q3
0.883 0.827
MYF6
M04086_2.00
Homo sapiens
BRHCASSTGWCR

YGWCASSTGDYV
SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_1
0.883 0.827
MYF6
M04087_2.00
Homo sapiens
BAACASSTGWYV

BRWCASSTGTTV
SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_2
0.883 0.827
Myf5
M09463_2.00
Mus musculus
NRRCAGCTGY

RCAGCTGYYN
Misc
Heinz et al.(2010)
GM-Myf5_GSE24852
0.842 0.788
MYF5
M09821_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYF5_Q6
0.842 0.788
MYOD1
M04116_2.00
Homo sapiens
BAACASSTGNYV

BRNCASSTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_1
0.839 0.788
MYOD1
M04117_2.00
Homo sapiens
BRVCASMTGDCG

CGHCAKSTGBYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_2
0.839 0.788
MYOD1
M04120_2.00
Homo sapiens
NAACASSTGNYV

BRNCASSTGTTN
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_1
0.839 0.788
MYOD1
M04121_2.00
Homo sapiens
BRMCASCTGDCR

YGHCAGSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_2
0.839 0.788
Myod1
M08060_2.00
Mus musculus
NVNRRCAGSTGBN

NVCASCTGYYNBN
ChIP-seq
Mathelier et al.(2014)
MA0499.1
0.839 0.788
MYOD1
M08724_2.00
Homo sapiens
NVNNRNRRCAGCTGN

NCAGCTGYYNYNNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_HUMAN.H11MO.0.A
0.839 0.788
Myod1
M08745_2.00
Mus musculus
NVNRRNRRCAGSTGB

VCASCTGYYNYYNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_MOUSE.H11MO.0.A
0.839 0.788
MYOD1
M09838_2.00
Homo sapiens
HRVCACCTGHBB

VVDCAGGTGBYD
Transfac
Matys et al.(2006)
V$MYOD_01
0.839 0.788
MYOD1
M09839_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOD_Q6_02
0.839 0.788
MYOD1
M09840_2.00
Homo sapiens
NVCABCTGNY

RNCAGVTGBN
Transfac
Matys et al.(2006)
V$MYOD_Q6
0.839 0.788
MYOD1
M04118_2.00
Homo sapiens
BAACANVTGTYV

BRACABNTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_1
0.839 0.788
MYOD1
M04119_2.00
Homo sapiens
BRRCASSTGDCR

YGHCASSTGYYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_2
0.839 0.788
MYOD1
M04122_2.00
Homo sapiens
NAMCASSTGBYV

BRVCASSTGKTN
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_1
0.839 0.788
MYOD1
M04123_2.00
Homo sapiens
BRMCASVTGNCR

YGNCABSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_2
0.839 0.788
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000000443 bHLH 99 150
ENSGACP00000000448 bHLH 78 129

Links

Other bHLH family TFs
Other Gasterosteus aculeatus TFs

273 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_26161 Aegilops tauschii F775_26161 I 0.000
F775_08647 Aegilops tauschii F775_08647 I 0.000
F775_52175 Aegilops tauschii F775_52175 N 0.000
AMTR_s00036p00107460 Amborella trichopoda AMTR_s00036p00107460 I 0.000
Aquca_034_00423 Aquilegia coerulea Aquca_034_00423 I 0.000
Aquca_011_00538 Aquilegia coerulea Aquca_011_00538 I 0.000
ATMYB86 Arabidopsis lyrata fgenesh2_kg.6__2630__AT5G26660.1 I 0.000
AtMYB19 Arabidopsis lyrata fgenesh2_kg.8__1111__AT5G52260.1 I 0.000
AtMYB19 Arabidopsis thaliana AT5G52260 I 0.000
MYB86 Arabidopsis thaliana AT5G26660 I 0.000
Bostr.7305s0041 Boechera stricta Bostr.7305s0041 I 0.000
Bostr.29827s0161 Boechera stricta Bostr.29827s0161 I 0.000
BRADI5G16672 Brachypodium distachyon BRADI5G16672 I 0.000
BRADI5G12417 Brachypodium distachyon BRADI5G12417 I 0.000
BRADI3G49970 Brachypodium distachyon BRADI3G49970 I 0.000
Bo2g156300 Brassica oleracea Bo2g156300 I 0.000
Bo3g023270 Brassica oleracea Bo3g023270 I 0.000
Bo7g095130 Brassica oleracea Bo7g095130 I 0.000
Bo9g010860 Brassica oleracea Bo9g010860 I 0.000
Bra036588 Brassica rapa Bra036588 I 0.000
Bra020526 Brassica rapa Bra020526 I 0.000
Bra029129 Brassica rapa Bra029129 I 0.000
Cagra.23492s0001 Capsella grandiflora Cagra.23492s0001 I 0.000
Carubv10001224m.g Capsella rubella Carubv10001224m.g I 0.000
evm.TU.supercontig_107.47 Carica papaya evm.TU.supercontig_107.47 I 0.000
Ca_19758 Cicer arietinum Ca_19758 I 0.000
Cla001724 Citrullus lanatus Cla001724 I 0.000
Cucsa.313950 Cucumis sativus Cucsa.313950 I 0.000
Eucgr.K00250 Eucalyptus grandis Eucgr.K00250 I 0.000
Thhalv10004450m.g Eutrema salsugineum Thhalv10004450m.g I 0.000
gene13281-v1.0-hybrid Fragaria vesca gene13281-v1.0-hybrid I 0.000
GLYMA10G38110 Glycine max GLYMA10G38110 I 0.000
GLYMA20G29710 Glycine max GLYMA20G29710 I 0.000
GLYMA16G31280 Glycine max GLYMA16G31280 I 0.000
GLYMA09G25655 Glycine max GLYMA09G25655 I 0.000
Gorai.007G011100 Gossypium raimondii Gorai.007G011100 I 0.000
Gorai.008G277900 Gossypium raimondii Gorai.008G277900 I 0.000
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.000
MLOC_73614 Hordeum vulgare MLOC_73614 I 0.000
LPERR04G16000 Leersia perrieri LPERR04G16000 I 0.000
Lus10005740.g Linum usitatissimum Lus10005740.g I 0.000
chr5.CM0148.380.nc Lotus japonicus chr5.CM0148.380.nc I 0.000
MDP0000152575 Malus domestica MDP0000152575 I 0.000
cassava26284.m1 Manihot esculenta cassava26284.m1 I 0.000
cassava21326.m1 Manihot esculenta cassava21326.m1 I 0.000
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.000
MTR_1g100667 Medicago truncatula MTR_1g100667 I 0.000
mgf024114m Mimulus guttatus mgf024114m I 0.000
GSMUA_Achr2G01830_001 Musa acuminata GSMUA_Achr2G01830_001 I 0.000
GSMUA_Achr8G11340_001 Musa acuminata GSMUA_Achr8G11340_001 I 0.000
OBART04G14990 Oryza barthii OBART04G14990 I 0.000
OBART02G25570 Oryza barthii OBART02G25570 I 0.000
OBART02G21860 Oryza barthii OBART02G21860 I 0.000
OBART04G19730 Oryza barthii OBART04G19730 I 0.000
OB04G22310 Oryza brachyantha OB04G22310 I 0.000
OB02G32950 Oryza brachyantha OB02G32950 I 0.000
OB02G29290 Oryza brachyantha OB02G29290 I 0.000
OB04G26810 Oryza brachyantha OB04G26810 I 0.000
ORGLA10G0151700 Oryza glaberrima ORGLA10G0151700 I 0.000
ORGLA04G0168700 Oryza glaberrima ORGLA04G0168700 I 0.000
ORGLA04G0119800 Oryza glaberrima ORGLA04G0119800 I 0.000
OGLUM02G26100 Oryza glumaepatula OGLUM02G26100 I 0.000
OGLUM02G22040 Oryza glumaepatula OGLUM02G22040 I 0.000
OGLUM04G19590 Oryza glumaepatula OGLUM04G19590 I 0.000
BGIOSGA016547 Oryza indica BGIOSGA016547 I 0.000
BGIOSGA016820 Oryza indica BGIOSGA016820 I 0.000
BGIOSGA008698 Oryza indica BGIOSGA008698 I 0.000
BGIOSGA008493 Oryza indica BGIOSGA008493 I 0.000
OMERI02G25080 Oryza meridionalis OMERI02G25080 I 0.000
OMERI02G21400 Oryza meridionalis OMERI02G21400 I 0.000
OMERI04G16730 Oryza meridionalis OMERI04G16730 I 0.000
ONIVA02G24090 Oryza nivara ONIVA02G24090 I 0.000
ONIVA02G28010 Oryza nivara ONIVA02G28010 I 0.000
ONIVA04G13130 Oryza nivara ONIVA04G13130 I 0.000
ONIVA04G17950 Oryza nivara ONIVA04G17950 I 0.000
OPUNC02G23410 Oryza punctata OPUNC02G23410 I 0.000
OPUNC04G17450 Oryza punctata OPUNC04G17450 I 0.000
ORUFI04G21270 Oryza rufipogon ORUFI04G21270 I 0.000
ORUFI02G22940 Oryza rufipogon ORUFI02G22940 I 0.000
ORUFI02G26980 Oryza rufipogon ORUFI02G26980 I 0.000
ORUFI04G16390 Oryza rufipogon ORUFI04G16390 I 0.000
OS04G0461000 Oryza sativa OS04G0461000 I 0.000
OS04G0532800 Oryza sativa OS04G0532800 I 0.000
Pavir.Gb00734 Panicum virgatum Pavir.Gb00734 I 0.000
Pavir.Ab02417 Panicum virgatum Pavir.Ab02417 I 0.000
Pavir.Ga00879 Panicum virgatum Pavir.Ga00879 I 0.000
PDK_20s1606731g001 Phoenix dactylifera PDK_20s1606731g001 I 0.000
POPTR_0012s13260 Populus trichocarpa POPTR_0012s13260 I 0.000
POPTR_0015s13190 Populus trichocarpa POPTR_0015s13190 I 0.000
Pm019344 Prunus mume Pm019344 I 0.000
PRUPE_ppa019729mg Prunus persica PRUPE_ppa019729mg I 0.000
SapurV1A.1077s0040 Salix purpurea SapurV1A.1077s0040 I 0.000
SapurV1A.0754s0180 Salix purpurea SapurV1A.0754s0180 I 0.000
Si010352m.g Setaria italica Si010352m.g I 0.000
Si017947m.g Setaria italica Si017947m.g I 0.000
Si012304m.g Setaria italica Si012304m.g I 0.000
PGSC0003DMG400014291 Solanum tuberosum PGSC0003DMG400014291 I 0.000
Sb06g023610 Sorghum bicolor Sb06g023610 I 0.000
Sb04g033680 Sorghum bicolor Sb04g033680 I 0.000
TCM_015157 Theobroma cacao TCM_015157 I 0.000
Traes_2BL_604FE7639 Triticum aestivum Traes_2BL_604FE7639 I 0.000
Traes_2BL_35241DE8D Triticum aestivum Traes_2BL_35241DE8D I 0.000
Traes_2AL_962A9D448 Triticum aestivum Traes_2AL_962A9D448 I 0.000
Traes_2BL_03F3475CD Triticum aestivum Traes_2BL_03F3475CD I 0.000
Traes_2AL_AF9357B4C Triticum aestivum Traes_2AL_AF9357B4C N 0.000
Traes_2DL_C964675DE Triticum aestivum Traes_2DL_C964675DE I 0.000
Traes_2BL_7CEC6A8D7 Triticum aestivum Traes_2BL_7CEC6A8D7 I 0.000
Traes_6AL_D10CBA40D Triticum aestivum Traes_6AL_D10CBA40D I 0.000
Traes_6BL_CE61B9510 Triticum aestivum Traes_6BL_CE61B9510 I 0.000
Traes_6DL_A014E9069 Triticum aestivum Traes_6DL_A014E9069 I 0.000
Traes_2AL_2D4100475 Triticum aestivum Traes_2AL_2D4100475 I 0.000
TRIUR3_27902 Triticum urartu TRIUR3_27902 N 0.000
TRIUR3_25784 Triticum urartu TRIUR3_25784 I 0.000
TRIUR3_15022 Triticum urartu TRIUR3_15022 N 0.000
TRIUR3_15020 Triticum urartu TRIUR3_15020 I 0.000
TRIUR3_32691 Triticum urartu TRIUR3_32691 I 0.000
GRMZM2G496770 Zea mays GRMZM2G496770 I 0.000
GRMZM2G170049 Zea mays GRMZM2G170049 I 0.000
GRMZM2G032655 Zea mays GRMZM2G032655 I 0.000