NPAS2 (Gallus gallus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSGALG00000016774 T034530_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
The protein encoded by this gene is a member of the basic helix-loop-helix (bHLH)-PAS family of transcription factors. A similar mouse protein may play a regulatory role in the acquisition of specific types of memory. It also may function as a part of a molecular clock operative in the mammalian forebrain. [provided by RefSeq, Feb 2014]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Npas2
M01731_2.00
Mus musculus
NVCACGTGBN

NVCACGTGBN
PBM
Weirauch et al.(2014)
pTH5457
0.914 1.000
NPAS2
M04158_2.00
Homo sapiens
NRCACGTGKH

DMCACGTGYN
SELEX
Yin et al.(2017)
NPAS2_eDBD_HT-SELEX
0.914 1.000
Npas2
M09468_2.00
Mus musculus
VKCACRTGKM

KMCAYGTGMB
Misc
Heinz et al.(2010)
Liver-NPAS2_GSE39860
0.914 1.000
NPAS2
M04159_2.00
Homo sapiens
DVCRCRTGKH

DMCAYGYGBH
SELEX
Yin et al.(2017)
NPAS2_eDBD_Methyl-HT-SELEX
0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000035797 bHLH 10 59

Links

Other bHLH family TFs
Other Gallus gallus TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSPPYG00000012101 Pongo abelii ENSPPYG00000012101 I 0.914
NPAS2 Pan troglodytes ENSPTRG00000012287 I 0.914
NPAS2 Pteropus vampyrus ENSPVAG00000011717 I 0.914
NPAS2 Sus scrofa ENSSSCG00000008171 I 0.914
NPAS2 Procavia capensis ENSPCAG00000004689 I 0.914
ENSPANG00000000546 Papio anubis ENSPANG00000000546 I 0.914
Npas2 Mus musculus ENSMUSG00000026077 D 0.914
ENSOARG00000013285 Ovis aries ENSOARG00000013285 I 0.914
NPAS2 Oryctolagus cuniculus ENSOCUG00000002384 I 0.914
NPAS2 Otolemur garnettii ENSOGAG00000014490 I 0.914
ENSSTOG00000008934 Ictidomys tridecemlineatus ENSSTOG00000008934 I 0.914
NPAS2 Tupaia belangeri ENSTBEG00000012008 I 0.914
Tal_R012319 Tyto alba Tal_R012319 I 0.914
ENSMMUP00000012928 Macaca fascicularis ENSMMUP00000012928 I 0.914
ENSP00000338283-D1 Bos grunniens ENSP00000338283-D1 I 0.914
Gfo_R005610 Geospiza fortis Gfo_R005610 I 0.914
Afo_R015956 Aptenodytes forsteri Afo_R015956 I 0.914
Aan_R003197 Calypte anna Aan_R003197 I 0.914
NPAS2 Taeniopygia guttata ENSTGUG00000010003 I 0.914
ENSTSYG00000005382 Tarsius syrichta ENSTSYG00000005382 I 0.914
NPAS2 Tursiops truncatus ENSTTRG00000016446 I 0.914
NPAS2 Vicugna pacos ENSVPAG00000001242 I 0.914
ENSMPUG00000012117 Mustela putorius furo ENSMPUG00000012117 I 0.914
ENSNLEG00000014404 Nomascus leucogenys ENSNLEG00000014404 I 0.914
NPAS2 Dasypus novemcinctus ENSDNOG00000002520 I 0.914
ENSCSAG00000017176 Chlorocebus sabaeus ENSCSAG00000017176 I 0.914
ENSDORG00000015727 Dipodomys ordii ENSDORG00000015727 I 0.914
NPAS2 Equus caballus ENSECAG00000000171 I 0.914
NPAS2 Echinops telfairi ENSETEG00000008221 I 0.914
ENSCPOG00000002470 Cavia porcellus ENSCPOG00000002470 I 0.914
NPAS2 Callithrix jacchus ENSCJAG00000021202 I 0.914
ENSAPLG00000016315 Anas platyrhynchos ENSAPLG00000016315 I 0.914
NPAS2 Bos taurus ENSBTAG00000019697 I 0.914
NPAS2 Canis familiaris ENSCAFG00000002223 I 0.914
NPAS2 Choloepus hoffmanni ENSCHOG00000008122 I 0.914
ENSFALG00000003827 Ficedula albicollis ENSFALG00000003827 I 0.914
NPAS2 Felis catus ENSFCAG00000005306 I 0.914
NPAS2 Meleagris gallopavo ENSMGAG00000014799 I 0.914
NPAS2 Microcebus murinus ENSMICG00000016027 I 0.914
NPAS2 Macaca mulatta ENSMMUG00000009871 I 0.914
ENSLACG00000011834 Latimeria chalumnae ENSLACG00000011834 I 0.914
NPAS2 Loxodonta africana ENSLAFG00000016336 I 0.914
NPAS2 Homo sapiens ENSG00000170485 D 0.914
NPAS2 Gorilla gorilla ENSGGOG00000006420 I 0.914
ENSSHAG00000010526 Sarcophilus harrisii ENSSHAG00000010526 I 0.901
Npas2 Rattus norvegicus ENSRNOG00000013408 I 0.901
ENSMEUG00000000949 Macropus eugenii ENSMEUG00000000949 I 0.901
NPAS2 Monodelphis domestica ENSMODG00000001691 I 0.901
Ogr16001 Ophisaurus gracilis Ogr16001 I 0.894
NPAS2 Anolis carolinensis ENSACAG00000007946 I 0.894
Pvit_02251 Pogona vitticeps Pvit_02251 I 0.894
ENSOANG00000022558 Ornithorhynchus anatinus ENSOANG00000022558 I 0.890
Cmyd_10011837 Chelonia mydas Cmyd_10011837 I 0.882