ENSLACG00000000328 (Latimeria chalumnae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLACG00000000328 T034782_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tfap4
M01717_2.00
Mus musculus
VHCABVYGB

VCRBVTGDB
PBM
Weirauch et al.(2014)
pTH5067
0.724 1.000
TFAP4
M02776_2.00
Homo sapiens
AWCAGCTGWY

RWCAGCTGWT
SELEX
Jolma et al.(2013)
TFAP4_1
0.724 1.000
TFAP4
M02777_2.00
Homo sapiens
AWCAGCTGWT

AWCAGCTGWT
SELEX
Jolma et al.(2013)
TFAP4_2
0.914 1.000
TFAP4
M04066_2.00
Homo sapiens
VHCAKVTGDB

VHCABMTGDB
SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1
0.914 1.000
TFAP4
M04067_2.00
Homo sapiens
VWCAGCTGWB

VWCAGCTGWB
SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2
0.914 1.000
TFAP4
M04070_2.00
Homo sapiens
RHCAYVTGDB

VHCABRTGDY
SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1
0.914 1.000
TFAP4
M04071_2.00
Homo sapiens
VHCAGCTGDB

VHCAGCTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2
0.724 1.000
TFAP4
M08712_2.00
Homo sapiens
VMNCAGCTGR

YCAGCTGNKB
Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A
0.724 1.000
TFAP4
M09453_2.00
Homo sapiens
NVHCAGCTGD

HCAGCTGDBN
Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738
0.724 1.000
TFAP4
M09802_2.00
Homo sapiens
MNGNCHVCAGCTGDBBBW

WVVVHCAGCTGBDGNCNK
Transfac
Matys et al.(2006)
V$AP4_01
0.724 1.000
TFAP4
M09803_2.00
Homo sapiens
NNSAGCTGHB

VDCAGCTSNN
Transfac
Matys et al.(2006)
V$AP4_Q5
0.914 1.000
TFAP4
M09804_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP4_Q6_01
0.914 1.000
TFAP4
M09805_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP4_Q6_02
0.914 1.000
TFAP4
M09806_2.00
Homo sapiens
NVCAGCTGHB

VDCAGCTGBN
Transfac
Matys et al.(2006)
V$AP4_Q6
0.914 1.000
TFAP4
M04068_2.00
Homo sapiens
DHCABMTGDN

NHCAKVTGDH
SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1
0.724 1.000
TFAP4
M04069_2.00
Homo sapiens
AWCAGCTGWT

AWCAGCTGWT
SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2
0.724 1.000
TFAP4
M04072_2.00
Homo sapiens
VHCABVTGDB

VHCABVTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1
0.724 1.000
TFAP4
M04073_2.00
Homo sapiens
VHCAGCTGDB

VHCAGCTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2
0.724 1.000
crp
M03595_2.00
Drosophila melanogaster
AACAGCTGWT

AWCAGCTGTT
SELEX
Nitta et al.(2015)
crp_1
0.843 0.808
crp
M05937_2.00
Drosophila melanogaster
VAHCAGCTGAY

RTCAGCTGDWB
B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994
0.843 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000000362 bHLH 49 100
ENSLACP00000000363 bHLH 1 40

Links

Other bHLH family TFs
Other Latimeria chalumnae TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_079210 Acremonium chrysogenum ACRE_079210 N 0.000
NEUTE1DRAFT_151002 Neurospora tetrasperma NEUTE1DRAFT_151002 N 0.000
PFICI_01190 Pestalotiopsis fici PFICI_01190 N 0.000
S40285_00890 Stachybotrys chlorohalonata S40285_00890 N 0.000
S40288_08143 Stachybotrys chartarum S40288_08143 N 0.000
SMAC_04892 Sordaria macrospora SMAC_04892 N 0.000
SPBR_06896 Sporothrix brasiliensis SPBR_06896 N 0.000
THITE_2113700 Thielavia terrestris THITE_2113700 N 0.000
TRIATDRAFT_128029 Trichoderma atroviride TRIATDRAFT_128029 N 0.000
TRIREDRAFT_63532 Trichoderma reesei TRIREDRAFT_63532 N 0.000
TRIVIDRAFT_55751 Trichoderma virens TRIVIDRAFT_55751 N 0.000
UV8b_4997 Ustilaginoidea virens UV8b_4997 N 0.000
VDAG_03306 Verticillium dahliae VDAG_03306 N 0.000
VHEMI06414 Torrubiella hemipterigena VHEMI06414 N 0.000
X797_003693 Metarhizium robertsii X797_003693 N 0.000
estExt_fgenesh1_pm.C_sca_1_chr1_3_00106 Nectria haematococca estExt_fgenesh1_pm.C_sca_1_chr1_3_00106 N 0.000
estExt_Genewise1Plus.C_40043 Neurospora discreta estExt_Genewise1Plus.C_40043 N 0.000
NechaG103092 Fusarium solani NechaG103092 N 0.000
MGG_14728 Magnaporthe oryzae MGG_14728 N 0.000
CFIO01_13191 Colletotrichum fioriniae CFIO01_13191 N 0.000
CGGC5_4890 Colletotrichum gloeosporioides CGGC5_4890 N 0.000
CH063_10089 Colletotrichum higginsianum CH063_10089 N 0.000
CMQ_7830 Grosmannia clavigera CMQ_7830 N 0.000
CSUB01_03848 Colletotrichum sublineola CSUB01_03848 N 0.000
CTHT_0061100 Chaetomium thermophilum CTHT_0061100 N 0.000
F503_04484 Ophiostoma piceae uamh F503_04484 N 0.000
FFUJ_01368 Fusarium fujikuroi FFUJ_01368 N 0.000
FGRRES_01176 Fusarium graminearum FGRRES_01176 N 0.000
FOXG_00215 Fusarium oxysporum FOXG_00215 N 0.000
FPSE_02607 Fusarium pseudograminearum FPSE_02607 N 0.000
FVEG_01303 Fusarium verticillioides FVEG_01303 N 0.000
GGTG_12840 Gaeumannomyces graminis GGTG_12840 N 0.000
GLRG_04043 Colletotrichum graminicola GLRG_04043 N 0.000
HMPREF1624_07538 Sporothrix schenckii HMPREF1624_07538 N 0.000
MAPG_00613 Magnaporthe poae MAPG_00613 N 0.000
estExt_Genewise1Plus.C_140036 Cryphonectria parasitica estExt_Genewise1Plus.C_140036 N 0.000