ENSLOCG00000000641 (Lepisosteus oculatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLOCG00000000641 T034982_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Usf1
M01732_2.00 		Mus musculus
NRYCACGTGNN
NNCACGTGRYN		 PBM
Weirauch et al.(2014)
pTH4376 		0.843 0.944
USF1
M02792_2.00 		Homo sapiens
RNCACGTGRY
RYCACGTGNY		 SELEX
Jolma et al.(2013)
USF1_1 		0.843 0.944
USF1
M04146_2.00 		Homo sapiens
NVCACGTGVCN
NGBCACGTGBN		 SELEX
Yin et al.(2017)
USF1_FL_HT-SELEX 		0.843 0.944
USF1
M08056_2.00 		Homo sapiens
RGTCACRTGVB
VBCAYGTGACY		 ChIP-seq
Mathelier et al.(2014)
MA0093.2 		0.843 0.944
USF1
M07807_2.00 		Homo sapiens
VGTCACGTGRBSVVV
BBBSVYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
A549_USF1_HudsonAlpha 		0.843 0.944
USF1
M07808_2.00 		Homo sapiens
VVGTCACGTGVBSVS
SBSVBCACGTGACBB		 ChIP-seq
Gerstein et al.(2012)
GM12878_USF1_HudsonAlpha 		0.843 0.944
USF1
M07809_2.00 		Homo sapiens
RGTCACGTGVBSVNN
NNBSVBCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF1_HudsonAlpha 		0.843 0.944
USF1
M07810_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
HepG2_USF1_HudsonAlpha 		0.843 0.944
USF1
M07811_2.00 		Homo sapiens
NVGTCACGTGVSSV
BSSBCACGTGACBN		 ChIP-seq
Gerstein et al.(2012)
K562_USF1_HudsonAlpha 		0.843 0.944
USF1
M08733_2.00 		Homo sapiens
VGTCACGTGVBS
SVBCACGTGACB		 Misc
Kulakovskiy et al.(2013)
USF1_HUMAN.H11MO.0.A 		0.843 0.944
Usf1
M08756_2.00 		Mus musculus
NNGTCACGTGVBS
SVBCACGTGACNN		 Misc
Kulakovskiy et al.(2013)
USF1_MOUSE.H11MO.0.A 		0.843 0.944
USF1
M09460_2.00 		Homo sapiens
YCACGTGRBN
NVYCACGTGR		 Misc
Heinz et al.(2010)
GM12878-Usf1_GSE32465 		0.843 0.944
USF1
M09867_2.00 		Homo sapiens
NNRYCACGTGRYNN
NNRYCACGTGRYNN		 Transfac
Matys et al.(2006)
V$USF_01 		0.843 0.944
USF1
M09868_2.00 		Homo sapiens
NNRNCAYRTGNYNN
NNRNCAYRTGNYNN		 Transfac
Matys et al.(2006)
V$USF_02 		0.843 0.944
USF1
M09869_2.00 		Homo sapiens
HCACGTGH
DCACGTGD		 Transfac
Matys et al.(2006)
V$USF_C 		0.843 0.944
USF1
M04147_2.00 		Homo sapiens
VHCAYGTGAYN
NRTCACRTGDB		 SELEX
Yin et al.(2017)
USF1_FL_Methyl-HT-SELEX 		0.843 0.944
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000000713 bHLH 199 254

Links

Other bHLH family TFs
Other Lepisosteus oculatus TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSXMAG00000006484 Xiphophorus maculatus ENSXMAG00000006484 I 0.901
ENSPFOG00000005160 Poecilia formosa ENSPFOG00000005160 I 0.901
ENSAMXG00000012300 Astyanax mexicanus ENSAMXG00000012300 N 0.889
ENSAMXG00000010483 Astyanax mexicanus ENSAMXG00000010483 N 0.889
usf1 Danio rerio ENSDARG00000041689 N 0.889
ENSGMOG00000009783 Gadus morhua ENSGMOG00000009783 I 0.876
ENSONIG00000016360 Oreochromis niloticus ENSONIG00000016360 I 0.858
ENSAMXG00000009564 Astyanax mexicanus ENSAMXG00000009564 I 0.858
USF2 Oryzias latipes ENSORLG00000015114 I 0.858
usf2 Danio rerio ENSDARG00000020228 I 0.858
USF2 Takifugu rubripes ENSTRUG00000005182 I 0.858
usf1 Tetraodon nigroviridis ENSTNIG00000014361 I 0.846
usf1 Gasterosteus aculeatus ENSGACG00000005115 I 0.846
ENSLACG00000001157 Latimeria chalumnae ENSLACG00000001157 I 0.846
usf1 Takifugu rubripes ENSTRUG00000005343 I 0.846
usf1 Oryzias latipes ENSORLG00000015402 I 0.846
ENSPMAG00000009581 Petromyzon marinus ENSPMAG00000009581 N 0.846
USF1 Pan troglodytes ENSPTRG00000001565 I 0.843
Usf1 Rattus norvegicus ENSRNOG00000004255 I 0.843
USF1 Pteropus vampyrus ENSPVAG00000005489 I 0.843
ENSPSIG00000008116 Pelodiscus sinensis ENSPSIG00000008116 I 0.843
ENSPPYG00000000619 Pongo abelii ENSPPYG00000000619 I 0.843
Pvit_07548 Pogona vitticeps Pvit_07548 I 0.843
Ogr08237 Ophisaurus gracilis Ogr08237 I 0.843
ENSP00000357000-D1 Bos grunniens ENSP00000357000-D1 I 0.843
ENSSHAG00000016124 Sarcophilus harrisii ENSSHAG00000016124 I 0.843
USF1 Tupaia belangeri ENSTBEG00000003164 I 0.843
USF1 Vicugna pacos ENSVPAG00000008421 I 0.843
usf1.S Xenopus laevis XB-GENE-6255904 I 0.843
Alligator_sinensis_CCG013447.1 Alligator sinensis Alligator_sinensis_CCG013447.1 I 0.843
ENSMMUP00000002682 Macaca fascicularis ENSMMUP00000002682 I 0.843
USF1 Tursiops truncatus ENSTTRG00000009151 I 0.843
ENSPANG00000016141 Papio anubis ENSPANG00000016141 I 0.843
ENSSTOG00000012364 Ictidomys tridecemlineatus ENSSTOG00000012364 I 0.843
usf1 Xenopus tropicalis XB-GENE-5918718 I 0.843
B39674 Xenopus laevis B39674 I 0.843
USF1 Sus scrofa ENSSSCG00000006371 I 0.843
USF1 Oryctolagus cuniculus ENSOCUG00000002352 I 0.843
USF1 Equus caballus ENSECAG00000004755 I 0.843
ARHGAP30 Dasypus novemcinctus ENSDNOG00000005811 I 0.843
USF1 Felis catus ENSFCAG00000012307 I 0.843
USF1 Homo sapiens ENSG00000158773 D 0.843
USF1 Gorilla gorilla ENSGGOG00000003935 I 0.843
ENSCSAG00000002622 Chlorocebus sabaeus ENSCSAG00000002622 I 0.843
USF1 Cavia porcellus ENSCPOG00000003957 I 0.843
USF1 Bos taurus ENSBTAG00000017873 I 0.843
USF1 Canis familiaris ENSCAFG00000012689 I 0.843
USF1 Choloepus hoffmanni ENSCHOG00000011010 I 0.843
USF1 Callithrix jacchus ENSCJAG00000005396 I 0.843
USF1 Loxodonta africana ENSLAFG00000011338 I 0.843
ENSMEUG00000009683 Macropus eugenii ENSMEUG00000009683 I 0.843
ENSNLEG00000013935 Nomascus leucogenys ENSNLEG00000013935 I 0.843
ENSOARG00000003162 Ovis aries ENSOARG00000003162 I 0.843
ENSOARG00000009376 Ovis aries ENSOARG00000009376 I 0.843
ENSAMEG00000015606 Ailuropoda melanoleuca ENSAMEG00000015606 I 0.843
Usf1 Mus musculus ENSMUSG00000026641 D 0.843
USF1 Ochotona princeps ENSOPRG00000003858 I 0.843
USF1 Microcebus murinus ENSMICG00000007199 I 0.843
USF1 Myotis lucifugus ENSMLUG00000009179 I 0.843
USF1 Macaca mulatta ENSMMUG00000002003 I 0.843
USF1 Monodelphis domestica ENSMODG00000005443 I 0.843
ENSOGAG00000006705 Otolemur garnettii ENSOGAG00000006705 I 0.843
ENSMPUG00000014181 Mustela putorius furo ENSMPUG00000014181 I 0.841