ENSLOCG00000017878 (Lepisosteus oculatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLOCG00000017878 T035080_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MSGN1
M04144_2.00
Homo sapiens
NVMCAWWTGGYN

NRCCAWWTGKBN
SELEX
Yin et al.(2017)
MSGN1_eDBD_HT-SELEX
0.855 0.836
Msgn1
M08772_2.00
Mus musculus
NNRMCAAATGGY

RCCATTTGKYNN
Misc
Kulakovskiy et al.(2013)
MSGN1_MOUSE.H11MO.0.C
0.855 0.836
MSGN1
M04145_2.00
Homo sapiens
NRMCAWWTGSYN

NRSCAWWTGKYN
SELEX
Yin et al.(2017)
MSGN1_eDBD_Methyl-HT-SELEX
0.855 0.836
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000021981 bHLH 99 153

Links

Other bHLH family TFs
Other Lepisosteus oculatus TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.000
RAP2.7 Arabidopsis lyrata fgenesh2_kg.4__825__AT2G28550.1 N 0.000
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.000
Bostr.27991s0069 Boechera stricta Bostr.27991s0069 N 0.000
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.000
Bo3g040110 Brassica oleracea Bo3g040110 N 0.000
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.000
Cla013460 Citrullus lanatus Cla013460 N 0.000
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.000
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.000
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.000
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.000
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.000
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.000
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.000
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.000
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.000
OGLUM05G01570 Oryza glumaepatula OGLUM05G01570 N 0.000
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.000
OMERI05G01620 Oryza meridionalis OMERI05G01620 N 0.000
ONIVA05G01600 Oryza nivara ONIVA05G01600 N 0.000
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.000
ORUFI05G01620 Oryza rufipogon ORUFI05G01620 N 0.000
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.000
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.000
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.000
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.000
Solyc09g007260.2 Solanum lycopersicum Solyc09g007260.2 N 0.000
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.000
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.000
Sb09g002080 Sorghum bicolor Sb09g002080 N 0.000
TCM_042000 Theobroma cacao TCM_042000 I 0.000
TCM_022077 Theobroma cacao TCM_022077 I 0.000
TCM_043051 Theobroma cacao TCM_043051 N 0.000
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.000