CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMEUG00000009683
(
Macropus eugenii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSMEUG00000009683
T035135_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Usf1
M01732_2.00
Mus musculus
NRYCACGTGNN
NNCACGTGRYN
PBM
Weirauch et al.(2014)
pTH4376
0.914
0.981
USF1
M02792_2.00
Homo sapiens
RNCACGTGRY
RYCACGTGNY
SELEX
Jolma et al.(2013)
USF1_1
0.914
0.981
USF1
M04146_2.00
Homo sapiens
NVCACGTGVCN
NGBCACGTGBN
SELEX
Yin et al.(2017)
USF1_FL_HT-SELEX
0.914
0.981
USF1
M08056_2.00
Homo sapiens
RGTCACRTGVB
VBCAYGTGACY
ChIP-seq
Mathelier et al.(2014)
MA0093.2
0.914
0.981
USF1
M07807_2.00
Homo sapiens
VGTCACGTGRBSVVV
BBBSVYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
A549_USF1_HudsonAlpha
0.914
0.981
USF1
M07808_2.00
Homo sapiens
VVGTCACGTGVBSVS
SBSVBCACGTGACBB
ChIP-seq
Gerstein et al.(2012)
GM12878_USF1_HudsonAlpha
0.914
0.981
USF1
M07809_2.00
Homo sapiens
RGTCACGTGVBSVNN
NNBSVBCACGTGACY
ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF1_HudsonAlpha
0.914
0.981
USF1
M07810_2.00
Homo sapiens
VGTCACGTGRB
VYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
HepG2_USF1_HudsonAlpha
0.914
0.981
USF1
M07811_2.00
Homo sapiens
NVGTCACGTGVSSV
BSSBCACGTGACBN
ChIP-seq
Gerstein et al.(2012)
K562_USF1_HudsonAlpha
0.914
0.981
USF1
M08733_2.00
Homo sapiens
VGTCACGTGVBS
SVBCACGTGACB
Misc
Kulakovskiy et al.(2013)
USF1_HUMAN.H11MO.0.A
0.914
0.981
Usf1
M08756_2.00
Mus musculus
NNGTCACGTGVBS
SVBCACGTGACNN
Misc
Kulakovskiy et al.(2013)
USF1_MOUSE.H11MO.0.A
0.914
0.981
USF1
M09460_2.00
Homo sapiens
YCACGTGRBN
NVYCACGTGR
Misc
Heinz et al.(2010)
GM12878-Usf1_GSE32465
0.914
0.981
USF1
M09867_2.00
Homo sapiens
NNRYCACGTGRYNN
NNRYCACGTGRYNN
Transfac
Matys et al.(2006)
V$USF_01
0.914
0.981
USF1
M09868_2.00
Homo sapiens
NNRNCAYRTGNYNN
NNRNCAYRTGNYNN
Transfac
Matys et al.(2006)
V$USF_02
0.914
0.981
USF1
M09869_2.00
Homo sapiens
HCACGTGH
DCACGTGD
Transfac
Matys et al.(2006)
V$USF_C
0.914
0.981
USF1
M04147_2.00
Homo sapiens
VHCAYGTGAYN
NRTCACRTGDB
SELEX
Yin et al.(2017)
USF1_FL_Methyl-HT-SELEX
0.914
0.981
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000008828
bHLH
200
255
RRAQHNEVERRRRDKINNWIVQLSKIIPDCSMENTKSGQSKGGILSKACDYIQELR
Links
Other
bHLH
family TFs
Other
Macropus eugenii
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_09590
Verticillium albo atrum
VDBG_09590
N
0.000
MGU_09688
Metarhizium guizhouense
MGU_09688
N
0.000
NechaG48150
Fusarium solani
NechaG48150
N
0.000
PMAA_094680
Talaromyces marneffei
PMAA_094680
N
0.000
PVAR5_4693
Byssochlamys spectabilis
PVAR5_4693
N
0.000
S40285_07120
Stachybotrys chlorohalonata
S40285_07120
N
0.000
S40288_03847
Stachybotrys chartarum
S40288_03847
N
0.000
TRIATDRAFT_230088
Trichoderma atroviride
TRIATDRAFT_230088
N
0.000
TRIREDRAFT_27600
Trichoderma reesei
TRIREDRAFT_27600
N
0.000
TRIVIDRAFT_124941
Trichoderma virens
TRIVIDRAFT_124941
N
0.000
TRIVIDRAFT_28900
Trichoderma virens
TRIVIDRAFT_28900
N
0.000
TSTA_046470
Talaromyces stipitatus
TSTA_046470
N
0.000
VDBG_09590
Verticillium alfalfae
VDBG_09590
N
0.000
VHEMI01686
Torrubiella hemipterigena
VHEMI01686
N
0.000
W97_06772
Coniosporium apollinis
W97_06772
N
0.000
X797_002538
Metarhizium robertsii
X797_002538
N
0.000
X797_007108
Metarhizium robertsii
X797_007108
N
0.000
e_gw1.27.52.1
Nectria haematococca
e_gw1.27.52.1
N
0.000
MGU_07705
Metarhizium guizhouense
MGU_07705
N
0.000
MGG_07845
Magnaporthe oryzae
MGG_07845
N
0.000
AUEXF2481DRAFT_422292
Aureobasidium subglaciale
AUEXF2481DRAFT_422292
N
0.000
ATEG_08370
Aspergillus terreus
CADATEAG00005065
N
0.000
CCM_07587
Cordyceps militaris
CCM_07587
N
0.000
Cob_11269
Colletotrichum orbiculare
Cob_11269
N
0.000
COCC4DRAFT_62224
Bipolaris maydis
COCC4DRAFT_62224
N
0.000
COCVIDRAFT_42469
Bipolaris victoriae
COCVIDRAFT_42469
N
0.000
FFUJ_06596
Fusarium fujikuroi
FFUJ_06596
N
0.000
FGRRES_03919
Fusarium graminearum
FGRRES_03919
N
0.000
FOXG_02769
Fusarium oxysporum
FOXG_02769
N
0.000
FPSE_05357
Fusarium pseudograminearum
FPSE_05357
N
0.000
H072_6817
Dactylellina haptotyla
H072_6817
N
0.000
MAC_06346
Metarhizium acridum
MAC_06346
N
0.000
MAJ_05947
Metarhizium majus
MAJ_05947
N
0.000
MAJ_07613
Metarhizium majus
MAJ_07613
N
0.000
MANI_020045
Metarhizium anisopliae
MANI_020045
N
0.000
MAPG_09377
Magnaporthe poae
MAPG_09377
N
0.000
MBR_00971
Metarhizium brunneum
MBR_00971
N
0.000
PMAA_094680
Penicillium marneffei
PMAA_094680
N
0.000