Ascl1 (Mus musculus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSMUSG00000020052 T035672_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Ascl1
M08748_2.00
Mus musculus
BHSCASCTGCYBBN

NVVRGCAGSTGSDV
Misc
Kulakovskiy et al.(2013)
ASCL1_MOUSE.H11MO.0.A
(Direct) (Direct)
Ascl1
M09464_2.00
Mus musculus
NVCABCTGBBNN

NNVVCAGVTGBN
Misc
Heinz et al.(2010)
NeuralTubes-Ascl1_GSE55840
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ASCL1
M04135_2.00
Homo sapiens
NRCASSTGYN

NRCASSTGYN
SELEX
Yin et al.(2017)
ASCL1_eDBD_HT-SELEX
0.914 1.000
ASCL1
M08055_2.00
Homo sapiens
NNRGCAGCTGSNN

NNSCAGCTGCYNN
ChIP-seq
Mathelier et al.(2014)
MA1100.1
0.914 1.000
ASCL1
M08730_2.00
Homo sapiens
NNVCASCTGCYBYN

NRVRGCAGSTGBNN
Misc
Kulakovskiy et al.(2013)
ASCL1_HUMAN.H11MO.0.A
0.914 1.000
ASCL1
M09855_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MASH1_Q6_01
0.914 1.000
ASCL1
M09856_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MASH1_Q6_02
0.914 1.000
ASCL1
M09857_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MASH1_Q6
0.914 1.000
ASCL1
M04136_2.00
Homo sapiens
NRCAGCTGYN

NRCAGCTGYN
SELEX
Yin et al.(2017)
ASCL1_eDBD_Methyl-HT-SELEX
0.914 1.000
Ascl2
M00117_2.00
Mus musculus
NVCABVTGBN

NVCABVTGBN
PBM
Badis et al.(2009)
Ascl2_2654
0.871 0.880
Ascl2
M02814_2.00
Mus musculus
RRCAGCTGYY

RRCAGCTGYY
SELEX
Jolma et al.(2013)
Ascl2_1
0.871 0.880
Ascl2
M08744_2.00
Mus musculus
RGCAGSTGB

VCASCTGCY
Misc
Kulakovskiy et al.(2013)
ASCL2_MOUSE.H11MO.0.C
0.871 0.880
ASCL2
M04207_2.00
Homo sapiens
NRCAGCTGYN

NRCAGCTGYN
SELEX
Yin et al.(2017)
ASCL2_eDBD_HT-SELEX
0.871 0.860
ASCL2
M04209_2.00
Homo sapiens
VCACRACGCD

HGCGTYGTGB
SELEX
Yin et al.(2017)
ASCL2_FL_HT-SELEX_1
0.871 0.860
ASCL2
M04210_2.00
Homo sapiens
NRCAGCTGYN

NRCAGCTGYN
SELEX
Yin et al.(2017)
ASCL2_FL_HT-SELEX_2
0.871 0.860
ASCL2
M04208_2.00
Homo sapiens
NRCAGCTGYN

NRCAGCTGYN
SELEX
Yin et al.(2017)
ASCL2_eDBD_Methyl-HT-SELEX
0.871 0.860
ASCL2
M04211_2.00
Homo sapiens
VRCAGCTGYB

VRCAGCTGYB
SELEX
Yin et al.(2017)
ASCL2_FL_Methyl-HT-SELEX
0.871 0.860
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000020243 bHLH 116 166

Links

Other bHLH family TFs
Other Mus musculus TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG011840.1 Alligator sinensis Alligator_sinensis_CCG011840.1 I 0.000
Brh_R003862 Buceros rhinoceros Brh_R003862 I 0.000
DPF1 Homo sapiens ENSG00000011332 D 0.000
Dpf3 Rattus norvegicus ENSRNOG00000008086 I 0.000
DPF3 Pan troglodytes ENSPTRG00000030704 I 0.000
DPF3 Oryctolagus cuniculus ENSOCUG00000016740 I 0.000
Dpf3 Mus musculus ENSMUSG00000021221 I 0.000
DPF3 Canis familiaris ENSCAFG00000016783 I 0.000
DPF3 Callithrix jacchus ENSCJAG00000014522 I 0.000
DPF3 Homo sapiens ENSG00000205683 I 0.000
DPF3 Loxodonta africana ENSLAFG00000002265 I 0.000
DPF3 Meleagris gallopavo ENSMGAG00000011727 I 0.000
ENSNLEG00000002403 Nomascus leucogenys ENSNLEG00000002403 I 0.000
ENSOANG00000029605 Ornithorhynchus anatinus ENSOANG00000029605 I 0.000
ENSPPYG00000005963 Pongo abelii ENSPPYG00000005963 I 0.000
ENSPSIG00000007030 Pelodiscus sinensis ENSPSIG00000007030 I 0.000
ENSSHAG00000014524 Sarcophilus harrisii ENSSHAG00000014524 I 0.000
ENSSTOG00000011091 Ictidomys tridecemlineatus ENSSTOG00000011091 I 0.000