CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sohlh2
(
Mus musculus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSMUSG00000027794
T035692_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Sohlh2
M01733_2.00
Mus musculus
NNHNCGTGVN
NBCACGNDNN
PBM
Weirauch et al.(2014)
pTH5058
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Sohlh2
M09890_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEB1_01
0.894
0.959
SOHLH2
M01113_2.00
Homo sapiens
BCACGDRNN
NNYHCGTGV
PBM
Lambert et al.(2019)
pTH11270
0.849
0.857
SOHLH2
M04096_2.00
Homo sapiens
NBCACGTGCN
NGCACGTGVN
SELEX
Yin et al.(2017)
SOHLH2_eDBD_HT-SELEX
0.849
0.857
SOHLH2
M04097_2.00
Homo sapiens
NNMACGWDNN
NNHWCGTKNN
SELEX
Yin et al.(2017)
SOHLH2_eDBD_Methyl-HT-SELEX
0.849
0.857
For this family, TFs with SR scores >
0.838
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01733_2.00
bHLH
18
66
LHSTKEKLRRERIKSCCEQLRTLLPYVKGRKSDVASVIEATVDYVKQVR
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000029369
bHLH
204
252
LHSTKEKLRRERIKSCCEQLRTLLPYVKGRKSDVASVIEATVDYVKQVR
Links
Other
bHLH
family TFs
Other
Mus musculus
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy