Tcfl5 (Mus musculus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSMUSG00000038932 T035724_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Located in male germ cell nucleus. Is expressed in brain. Orthologous to human TCFL5 (transcription factor like 5). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcfl5
M01744_2.00		 Mus musculus
NBCDCGHGVN
NBCDCGHGVN		 PBM
Weirauch et al.(2014)
pTH4576		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCFL5
M04074_2.00 		Homo sapiens
KCRCGCGCHC
GDGCGCGYGM		 SELEX
Yin et al.(2017)
TCFL5_eDBD_HT-SELEX 		0.914 1.000
TCFL5
M04075_2.00 		Homo sapiens
BCRCGCGCMC
GKGCGCGYGV		 SELEX
Yin et al.(2017)
TCFL5_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01744_2.00 bHLH 16 66

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000040611 bHLH 390 440

Links

Other bHLH family TFs
Other Mus musculus TFs

Invalid Input OrderBy

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action