CLOCK (Otolemur garnettii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSOGAG00000012464 T036121_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Clock
M01735_2.00
Mus musculus
NNCAYRTGNN

NNCAYRTGNN
PBM
Weirauch et al.(2014)
pTH5056
0.914 0.980
CLOCK
M02789_2.00
Homo sapiens
DACACGTGYH

DRCACGTGTH
SELEX
Jolma et al.(2013)
CLOCK_1
0.914 0.980
CLOCK
M04129_2.00
Homo sapiens
NMCACGTGYN

NRCACGTGKN
SELEX
Yin et al.(2017)
CLOCK_eDBD_HT-SELEX
0.914 0.980
CLOCK
M08728_2.00
Homo sapiens
DBBBCAYKTGNNHB

VDNNCAMRTGVVVH
Misc
Kulakovskiy et al.(2013)
CLOCK_HUMAN.H11MO.0.C
0.914 0.980
Clock
M08760_2.00
Mus musculus
DBBBCAYKTGNNHB

VDNNCAMRTGVVVH
Misc
Kulakovskiy et al.(2013)
CLOCK_MOUSE.H11MO.0.C
0.914 0.980
Clock
M09473_2.00
Mus musculus
CACGTGNN

NNCACGTG
Misc
Heinz et al.(2010)
Liver-Clock_GSE39860
0.914 0.980
CLOCK
M09849_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CLOCK_Q6
0.914 0.980
CLOCK
M04130_2.00
Homo sapiens
NRCRCRTGBH

DVCAYGYGYN
SELEX
Yin et al.(2017)
CLOCK_eDBD_Methyl-HT-SELEX
0.914 0.980
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000011163 bHLH 36 86

Links

Other bHLH family TFs
Other Otolemur garnettii TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TIGD1 Homo sapiens ENSG00000221944 D 0.000
TIGD1 Gorilla gorilla ENSGGOG00000016685 I 0.000
ENSMICG00000012178 Microcebus murinus ENSMICG00000012178 I 0.000
TIGD1 Macaca mulatta ENSMMUG00000022150 I 0.000
ENSNLEG00000018314 Nomascus leucogenys ENSNLEG00000018314 I 0.000
TIGD1 Otolemur garnettii ENSOGAG00000030017 I 0.000
ENSPPYG00000013281 Pongo abelii ENSPPYG00000013281 I 0.000
TIGD1 Pan troglodytes ENSPTRG00000038833 I 0.000
ENSTSYG00000019343 Tarsius syrichta ENSTSYG00000019343 I 0.000
TIGD1 Canis familiaris ENSCAFG00000032642 I 0.000
ENSECAG00000017813 Equus caballus ENSECAG00000017813 I 0.000
TIGD1 Callithrix jacchus ENSCJAG00000013785 I 0.000
ENSCSAG00000006471 Chlorocebus sabaeus ENSCSAG00000006471 I 0.000
ENSCSAG00000016482 Chlorocebus sabaeus ENSCSAG00000016482 I 0.000
ENSCSAG00000017233 Chlorocebus sabaeus ENSCSAG00000017233 I 0.000
ENSP00000386186-D1 Bos grunniens ENSP00000386186-D1 I 0.000
ENSCSAG00000017455 Chlorocebus sabaeus ENSCSAG00000017455 N 0.000
ENSCSAG00000003348 Chlorocebus sabaeus ENSCSAG00000003348 N 0.000
ENSCSAG00000002353 Chlorocebus sabaeus ENSCSAG00000002353 N 0.000
ENSCSAG00000017666 Chlorocebus sabaeus ENSCSAG00000017666 N 0.000