MYF6 (Procavia capensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSPCAG00000001692 T036590_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Myf6
M00120_2.00
Mus musculus
NCRNNTGNY

RNCANNYGN
PBM
Badis et al.(2009)
Myf6_3824
0.914 1.000
Myf6
M01742_2.00
Mus musculus
RACAGHTGH

DCADCTGTY
PBM
Weirauch et al.(2014)
pTH5099
0.914 1.000
MYF6
M02780_2.00
Homo sapiens
AACARCTGTY

RACAGYTGTT
SELEX
Jolma et al.(2013)
MYF6_1
0.914 1.000
MYF6
M04084_2.00
Homo sapiens
BRHCASSTGWCR

YGWCASSTGDYV
SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_1
0.914 1.000
MYF6
M04085_2.00
Homo sapiens
NRACASSTGWYV

BRWCASSTGTYN
SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_2
0.914 1.000
MYF6
M05831_2.00
Homo sapiens
BRACAKNTGNY

RNCANMTGTYV
SMiLE-seq
Isakova et al.(2017)
MYF6
0.914 1.000
MYF6
M08717_2.00
Homo sapiens
CASCTGC

GCAGSTG
Misc
Kulakovskiy et al.(2013)
MYF6_HUMAN.H11MO.0.C
0.914 1.000
Myf6
M08767_2.00
Mus musculus
CASCTGC

GCAGSTG
Misc
Kulakovskiy et al.(2013)
MYF6_MOUSE.H11MO.0.C
0.914 1.000
MYF6
M09820_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MRF4_Q3
0.914 1.000
MYF6
M04086_2.00
Homo sapiens
BRHCASSTGWCR

YGWCASSTGDYV
SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_1
0.914 1.000
MYF6
M04087_2.00
Homo sapiens
BAACASSTGWYV

BRWCASSTGTTV
SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_2
0.914 1.000
MYOG
M04098_2.00
Homo sapiens
BRACAGCTGWCR

YGWCAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_1
0.883 0.865
MYOG
M04099_2.00
Homo sapiens
NAACAGCTGTYN

NRACAGCTGTTN
SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_2
0.883 0.865
MYOG
M04102_2.00
Homo sapiens
NRACARCTGWCR

YGWCAGYTGTYN
SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_1
0.883 0.865
MYOG
M04103_2.00
Homo sapiens
NAACARYTGTYN

NRACARYTGTTN
SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_2
0.883 0.865
Myog
M08061_2.00
Mus musculus
RRCAGCTGVNN

NNBCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0500.1
0.883 0.865
MYOG
M08721_2.00
Homo sapiens
BHVCAGCTGYYNB

VNRRCAGCTGBDV
Misc
Kulakovskiy et al.(2013)
MYOG_HUMAN.H11MO.0.B
0.883 0.865
Myog
M08755_2.00
Mus musculus
BHVCAGCTGYYNB

VNRRCAGCTGBDV
Misc
Kulakovskiy et al.(2013)
MYOG_MOUSE.H11MO.0.A
0.883 0.865
Myog
M09469_2.00
Mus musculus
RACAGCTG

CAGCTGTY
Misc
Heinz et al.(2010)
C2C12-MyoG_GSE36024
0.883 0.865
MYOG
M09829_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOGENIN_Q6_01
0.883 0.865
MYOG
M09830_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOGENIN_Q6
0.883 0.865
MYOG
M04100_2.00
Homo sapiens
BRACAGCTGTCR

YGACAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_1
0.883 0.865
MYOG
M04101_2.00
Homo sapiens
BAACAGCTGTYV

BRACAGCTGTTV
SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_2
0.883 0.865
MYOG
M04104_2.00
Homo sapiens
BRACAGCTGTCR

YGACAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_1
0.883 0.865
MYOG
M04105_2.00
Homo sapiens
NAACAGCTGTYN

NRACAGCTGTTN
SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_2
0.883 0.865
Myf5
M09463_2.00
Mus musculus
NRRCAGCTGY

RCAGCTGYYN
Misc
Heinz et al.(2010)
GM-Myf5_GSE24852
0.841 0.808
MYF5
M09821_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYF5_Q6
0.841 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000001573 bHLH 89 140

Links

Other bHLH family TFs
Other Procavia capensis TFs

Invalid Input OrderBy

220 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action