ENSPPYG00000009327 (Pongo abelii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSPPYG00000009327 T036862_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TCF3
M02775_2.00
Homo sapiens
NVCACCTGBN

NVCAGGTGBN
SELEX
Jolma et al.(2013)
TCF3_1
0.914 1.000
TCF3
M08710_2.00
Homo sapiens
VVCASCTGCHN

NDGCAGSTGBB
Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A
0.914 1.000
TCF3
M09791_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E12_Q6
0.914 1.000
TCF3
M09792_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_01
0.914 1.000
TCF3
M09793_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_02
0.914 1.000
TCF3
M09794_2.00
Homo sapiens
VVVVMCACCTGCNBB

VVNGCAGGTGKBBBB
Transfac
Matys et al.(2006)
V$E47_01
0.914 1.000
TCF3
M09795_2.00
Homo sapiens
NNKWRCACCTGYDNNN

NNNHRCAGGTGYWMNN
Transfac
Matys et al.(2006)
V$E47_02
0.914 1.000
Tcf3
M09465_2.00
Mus musculus
ABWTCAAAGS

SCTTTGAWVT
Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724
0.886 0.942
Tcf3
M09466_2.00
Mus musculus
VCAGCTGBNN

NNVCAGCTGB
Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978
0.886 0.942
Tcf3
M09886_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E47_05
0.886 0.942
Tcf12
M01740_2.00
Mus musculus
NVCAYCTGB

VCAGRTGBN
PBM
Weirauch et al.(2014)
pTH5071
0.886 0.923
TCF12
M04137_2.00
Homo sapiens
VCACSTGB

VCASGTGB
SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX
0.886 0.923
Tcf12
M08062_2.00
Mus musculus
RRCAGCTGNNN

NNNCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0521.1
0.886 0.923
TCF12
M07805_2.00
Homo sapiens
NVDSCAGSTGB

VCASCTGSHBN
ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha
0.886 0.923
TCF12
M07806_2.00
Homo sapiens
VCASCTGB

VCAGSTGB
ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha
0.886 0.923
TCF12
M08731_2.00
Homo sapiens
CMCASCTGSH

DSCAGSTGKG
Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A
0.886 0.923
Tcf12
M08762_2.00
Mus musculus
VMCASCTGSH

DSCAGSTGKB
Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A
0.886 0.923
TCF12
M09458_2.00
Homo sapiens
NNVCAGCTGB

VCAGCTGBNN
Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465
0.886 0.923
TCF12
M09858_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HEB_Q6
0.886 0.923
TCF12
M09859_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HTF4_Q2
0.886 0.923
TCF12
M09860_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_01
0.886 0.923
TCF12
M09861_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_03
0.886 0.923
TCF12
M09862_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_05
0.886 0.923
TCF12
M04138_2.00
Homo sapiens
NCAYCTGN

NCAGRTGN
SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX
0.886 0.923
Tcf3
M00753_2.00
Mus musculus
VCACCTGBN

NVCAGGTGB
PBM
Weirauch et al.(2013)
pTH3866
0.886 0.846
Tcf3
M01723_2.00
Mus musculus
NNVCACSTGB

VCASGTGBNN
PBM
Weirauch et al.(2014)
pTH4580
0.886 0.846
Tcf3
M00118_2.00
Mus musculus
VCAYCTGB

VCAGRTGB
PBM
Badis et al.(2009)
Tcfe2a_3865
0.886 0.846
Tcf4
M01750_2.00
Mus musculus
VCAGVTGBN

NVCABCTGB
PBM
Weirauch et al.(2014)
pTH5101
0.884 0.885
TCF4
M02807_2.00
Homo sapiens
HRCACCTGBN

NVCAGGTGYD
SELEX
Jolma et al.(2013)
TCF4_1
0.884 0.885
TCF4
M02808_2.00
Homo sapiens
NVCACCTBBN

NVVAGGTGBN
SELEX
Jolma et al.(2013)
TCF4_2
0.884 0.885
TCF4
M02728_2.00
Homo sapiens
RCACCTG

CAGGTGY
SELEX
Jolma et al.(2010)
TCF4_dimer
0.884 0.885
TCF4
M04214_2.00
Homo sapiens
VCACCTGB

VCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX
0.884 0.885
Tcf4
M08775_2.00
Mus musculus
HRCACCTGB

VCAGGTGYD
Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B
0.884 0.885
TCF4
M09461_2.00
Homo sapiens
ASWTCAAAGRVN

NBYCTTTGAWST
Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054
0.884 0.885
TCF4
M04215_2.00
Homo sapiens
VCACCTGN

NCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX
0.884 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000010467 bHLH 499 552

Links

Other bHLH family TFs
Other Pongo abelii TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00010p00030830 Amborella trichopoda AMTR_s00010p00030830 I 0.000
AMTR_s00095p00059370 Amborella trichopoda AMTR_s00095p00059370 I 0.000
BGIOSGA000451 Oryza indica BGIOSGA000451 I 0.000
Bo5g008940 Brassica oleracea Bo5g008940 I 0.000
Bo8g112540 Brassica oleracea Bo8g112540 I 0.000
Bostr.25219s0112 Boechera stricta Bostr.25219s0112 I 0.000
Bra018634 Brassica rapa Bra018634 I 0.000
Bra031622 Brassica rapa Bra031622 I 0.000
BRADI2G23890 Brachypodium distachyon BRADI2G23890 N 0.000
BRADI2G55567 Brachypodium distachyon BRADI2G55567 I 0.000
Cagra.4395s0022 Capsella grandiflora Cagra.4395s0022 I 0.000
Carubv10011576m.g Capsella rubella Carubv10011576m.g I 0.000
Ca_07292 Cicer arietinum Ca_07292 N 0.000
Ciclev10028428m.g Citrus clementina Ciclev10028428m.g I 0.000
Eucgr.B03855 Eucalyptus grandis Eucgr.B03855 I 0.000
fgenesh1_pm.C_scaffold_1000665 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000665 I 0.000
GRMZM2G060216 Zea mays GRMZM2G060216 N 0.000
GSMUA_Achr10G10300_001 Musa acuminata GSMUA_Achr10G10300_001 N 0.000
GSMUA_Achr11G26170_001 Musa acuminata GSMUA_Achr11G26170_001 N 0.000
LG2 Oryza sativa OS01G0859500 I 0.000
LPERR01G32640 Leersia perrieri LPERR01G32640 I 0.000
Lus10004876.g Linum usitatissimum Lus10004876.g I 0.000
Lus10020610.g Linum usitatissimum Lus10020610.g I 0.000
MLOC_65998 Hordeum vulgare MLOC_65998 I 0.000
MLOC_79223 Hordeum vulgare MLOC_79223 N 0.000
OB01G46780 Oryza brachyantha OB01G46780 I 0.000
OBART01G38000 Oryza barthii OBART01G38000 I 0.000
OGLUM01G42170 Oryza glumaepatula OGLUM01G42170 I 0.000
OLONG_014543 Oryza longistaminata OLONG_014543 I 0.000
OMERI01G34960 Oryza meridionalis OMERI01G34960 I 0.000
ONIVA04G25750 Oryza nivara ONIVA04G25750 I 0.000
OPUNC01G36830 Oryza punctata OPUNC01G36830 I 0.000
orange1.1g036039m.g Citrus sinensis orange1.1g036039m.g I 0.000
ORGLA01G0318100 Oryza glaberrima ORGLA01G0318100 I 0.000
ORUFI01G41330 Oryza rufipogon ORUFI01G41330 I 0.000
Pavir.Ea03760 Panicum virgatum Pavir.Ea03760 N 0.000
SapurV1A.0018s0400 Salix purpurea SapurV1A.0018s0400 I 0.000
Sb03g040530 Sorghum bicolor Sb03g040530 N 0.000
Si000955m.g Setaria italica Si000955m.g N 0.000
Solyc06g074320.2 Solanum lycopersicum Solyc06g074320.2 I 0.000
TGA9 Arabidopsis thaliana AT1G08320 D 0.000
Thhalv10007490m.g Eutrema salsugineum Thhalv10007490m.g I 0.000
Traes_1BL_B03720C3B Triticum aestivum Traes_1BL_B03720C3B N 0.000
Traes_1DL_AFDF3B024 Triticum aestivum Traes_1DL_AFDF3B024 N 0.000
Traes_3AL_C5E13251D Triticum aestivum Traes_3AL_C5E13251D I 0.000
Traes_3DL_4A4D552B2 Triticum aestivum Traes_3DL_4A4D552B2 I 0.000