CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ahr
(
Rattus norvegicus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSRNOG00000004342
T037174_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Enables nuclear receptor activity and toxic substance binding activity. Involved in several processes, including cellular response to organic cyclic compound; negative regulation of alkaline phosphatase activity; and regulation of cellular macromolecule biosynthetic process. Located in cytosol and nucleus. Human ortholog(s) of this gene implicated in retinitis pigmentosa 85. Orthologous to human AHR (aryl hydrocarbon receptor). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AHR
M08716_2.00
Homo sapiens
DCACGCNMH
DKNGCGTGH
Misc
Kulakovskiy et al.(2013)
AHR_HUMAN.H11MO.0.B
0.914
0.978
Ahr
M08747_2.00
Mus musculus
DCACGCNMH
DKNGCGTGH
Misc
Kulakovskiy et al.(2013)
AHR_MOUSE.H11MO.0.B
0.914
0.978
AHR
M09816_2.00
Homo sapiens
WSTCACGCDASYYBGRRS
SYYCVRRSTHGCGTGASW
Transfac
Matys et al.(2006)
V$AHR_01
0.914
0.978
AHR
M09817_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AHR_Q5
0.914
0.978
AHR
M09818_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AHR_Q6_01
0.914
0.978
AHR
M09819_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AHR_Q6
0.914
0.978
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000006618
bHLH
34
79
PSKRHRDRLNTELDRLASLLPFPQDVISKLDKLSVLRLSVSYLRAK
Links
Other
bHLH
family TFs
Other
Rattus norvegicus
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy