CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sohlh2
(
Rattus norvegicus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSRNOG00000038091
T037247_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Sohlh2
M09890_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEB1_01
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Sohlh2
M01733_2.00
Mus musculus
NNHNCGTGVN
NBCACGNDNN
PBM
Weirauch et al.(2014)
pTH5058
0.894
0.959
SOHLH2
M01113_2.00
Homo sapiens
BCACGDRNN
NNYHCGTGV
PBM
Lambert et al.(2019)
pTH11270
0.849
0.878
SOHLH2
M04096_2.00
Homo sapiens
NBCACGTGCN
NGCACGTGVN
SELEX
Yin et al.(2017)
SOHLH2_eDBD_HT-SELEX
0.849
0.878
SOHLH2
M04097_2.00
Homo sapiens
NNMACGWDNN
NNHWCGTKNN
SELEX
Yin et al.(2017)
SOHLH2_eDBD_Methyl-HT-SELEX
0.849
0.878
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000049772
bHLH
204
252
LHSSKEKLRRERIKFCCEQLRTLLPYVKGRKSDVASVIEATVDYVKQVR
Links
Other
bHLH
family TFs
Other
Rattus norvegicus
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sohlh2
Mus musculus
ENSMUSG00000027794
D
0.894
ENSOCUG00000017853
Oryctolagus cuniculus
ENSOCUG00000017853
I
0.881
ENSSSCG00000026164
Sus scrofa
ENSSSCG00000026164
I
0.881
ENSOGAG00000001168
Otolemur garnettii
ENSOGAG00000001168
I
0.881
ENSTBEG00000014863
Tupaia belangeri
ENSTBEG00000014863
I
0.881
ENSFCAG00000004161
Felis catus
ENSFCAG00000004161
I
0.881
ENSP00000393788-D1
Bos grunniens
ENSP00000393788-D1
I
0.881
ENSCPOG00000012403
Cavia porcellus
ENSCPOG00000012403
I
0.881
ENSTTRG00000010489
Tursiops truncatus
ENSTTRG00000010489
I
0.881
ENSBTAG00000018955
Bos taurus
ENSBTAG00000018955
I
0.881
ENSOARG00000010479
Ovis aries
ENSOARG00000010479
I
0.853
ENSOPRG00000004777
Ochotona princeps
ENSOPRG00000004777
I
0.851
ENSPPYG00000005276
Pongo abelii
ENSPPYG00000005276
I
0.849
ENSSHAG00000013234
Sarcophilus harrisii
ENSSHAG00000013234
I
0.849
ENSSTOG00000012257
Ictidomys tridecemlineatus
ENSSTOG00000012257
I
0.849
ENSMMUP00000001562
Macaca fascicularis
ENSMMUP00000001562
I
0.849
ENSTSYG00000004449
Tarsius syrichta
ENSTSYG00000004449
I
0.849
ENSPTRG00000005779
Pan troglodytes
ENSPTRG00000005779
I
0.849
ENSMPUG00000001856
Mustela putorius furo
ENSMPUG00000001856
I
0.849
ENSECAG00000000201
Equus caballus
ENSECAG00000000201
I
0.849
ENSCSAG00000017881
Chlorocebus sabaeus
ENSCSAG00000017881
I
0.849
ENSCJAG00000018188
Callithrix jacchus
ENSCJAG00000018188
I
0.849
ENSCAFG00000006206
Canis familiaris
ENSCAFG00000006206
I
0.849
SOHLH2
Homo sapiens
ENSG00000120669
D
0.849
CCDC169-SOHLH2
Homo sapiens
ENSG00000250709
I
0.849
ENSMMUG00000001172
Macaca mulatta
ENSMMUG00000001172
I
0.849
ENSMICG00000002484
Microcebus murinus
ENSMICG00000002484
I
0.849
ENSAMEG00000004619
Ailuropoda melanoleuca
ENSAMEG00000004619
I
0.849
ENSGGOG00000002130
Gorilla gorilla
ENSGGOG00000002130
I
0.849
ENSMODG00000009965
Monodelphis domestica
ENSMODG00000009965
I
0.849
ENSDNOG00000017970
Dasypus novemcinctus
ENSDNOG00000017970
I
0.838