Usf2 (Rattus norvegicus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSRNOG00000053725 T037252_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
ubiquitous transcription factor; may play a role in hormonal and dietary regulations [RGD, Feb 2006]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Usf2
M01752_2.00
Mus musculus
NNCACGTGAN

NTCACGTGNN
PBM
Weirauch et al.(2014)
pTH5265
0.914 1.000
Usf2
M08777_2.00
Mus musculus
NVGTCACGTGVBSVNNVNB

VNBNNBSVBCACGTGACBN
Misc
Kulakovskiy et al.(2013)
USF2_MOUSE.H11MO.0.A
0.914 1.000
Usf2
M09479_2.00
Mus musculus
NNCAYGTGVY

RBCACRTGNN
Misc
Heinz et al.(2010)
C2C12-Usf2_GSE36030
0.914 1.000
USF2
M04076_2.00
Homo sapiens
NVCACGTGVCN

NGBCACGTGBN
SELEX
Yin et al.(2017)
USF2_eDBD_HT-SELEX
0.871 0.981
USF2
M08050_2.00
Homo sapiens
NNVYCACGTGACHNNN

NNNDGTCACGTGRBNN
ChIP-seq
Mathelier et al.(2014)
MA0526.2
0.871 0.981
USF2
M07785_2.00
Homo sapiens
NGTCACGTGRBSVVV

BBBSVYCACGTGACN
ChIP-seq
Gerstein et al.(2012)
GM12878_USF2_Stanford
0.871 0.981
USF2
M07786_2.00
Homo sapiens
NVGTCACGTGRBSVVV

BBBSVYCACGTGACBN
ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF2_Stanford
0.871 0.981
USF2
M07787_2.00
Homo sapiens
RGTCACGTGVB

VBCACGTGACY
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_USF2_Stanford
0.871 0.981
USF2
M07788_2.00
Homo sapiens
NGTCACGTGRBSV

BSVYCACGTGACN
ChIP-seq
Gerstein et al.(2012)
HepG2_USF2_Stanford
0.871 0.981
USF2
M07789_2.00
Homo sapiens
RGTCACGTGRBSV

BSVYCACGTGACY
ChIP-seq
Gerstein et al.(2012)
K562_USF2_Stanford
0.871 0.981
USF2
M08715_2.00
Homo sapiens
NVGTCACGTGVBSVNNVNB

VNBNNBSVBCACGTGACBN
Misc
Kulakovskiy et al.(2013)
USF2_HUMAN.H11MO.0.A
0.871 0.981
USF2
M09812_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$USF2_01
0.871 0.981
USF2
M09813_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$USF2_02
0.871 0.981
USF2
M09814_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$USF2_Q6_01
0.871 0.981
USF2
M09815_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$USF2_Q6
0.871 0.981
USF2
M04077_2.00
Homo sapiens
VNCAYGTGACN

NGTCACRTGNB
SELEX
Yin et al.(2017)
USF2_eDBD_Methyl-HT-SELEX
0.871 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000072660 bHLH 229 284

Links

Other bHLH family TFs
Other Rattus norvegicus TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000000235 Ailuropoda melanoleuca ENSAMEG00000000235 I 0.871
Alligator_sinensis_CCG004656.1 Alligator sinensis Alligator_sinensis_CCG004656.1 I 0.871
USF2 Anolis carolinensis ENSACAG00000010293 I 0.846
ENSAMXG00000009564 Astyanax mexicanus ENSAMXG00000009564 I 0.846
ENSP00000222305-D1 Bos grunniens ENSP00000222305-D1 I 0.871
USF2 Bos taurus ENSBTAG00000017035 I 0.871
USF2 Callithrix jacchus ENSCJAG00000010451 I 0.860
USF2 Canis familiaris ENSCAFG00000007054 I 0.871
USF2 Cavia porcellus ENSCPOG00000012147 I 0.871
Cmyd_10000422 Chelonia mydas Cmyd_10000422 I 0.846
ENSCSAG00000004521 Chlorocebus sabaeus ENSCSAG00000004521 I 0.871
usf2 Danio rerio ENSDARG00000020228 I 0.846
USF2 Dasypus novemcinctus ENSDNOG00000003072 I 0.871
USF2 Equus caballus ENSECAG00000008583 I 0.871
USF2 Felis catus ENSFCAG00000008894 I 0.871
ENSGMOG00000013274 Gadus morhua ENSGMOG00000013274 I 0.846
ENSGMOG00000009783 Gadus morhua ENSGMOG00000009783 I 0.846
USF2 Gasterosteus aculeatus ENSGACG00000012475 I 0.846
USF2 Homo sapiens ENSG00000105698 D 0.871
ENSSTOG00000022219 Ictidomys tridecemlineatus ENSSTOG00000022219 I 0.871
ENSLACG00000001157 Latimeria chalumnae ENSLACG00000001157 I 0.858
ENSLACG00000003269 Latimeria chalumnae ENSLACG00000003269 I 0.846
ENSLOCG00000005321 Lepisosteus oculatus ENSLOCG00000005321 I 0.846
USF2 Loxodonta africana ENSLAFG00000029360 I 0.871
USF2 Macaca mulatta ENSMMUG00000011291 I 0.871
USF2 Microcebus murinus ENSMICG00000001519 I 0.871
USF2 Monodelphis domestica ENSMODG00000013843 I 0.846
ENSMPUG00000007099 Mustela putorius furo ENSMPUG00000007099 I 0.871
Usf2 Mus musculus ENSMUSG00000058239 D 0.914
Myotis_brandtii_Usf2_10035177 Myotis brandtii Myotis_brandtii_Usf2_10035177 I 0.846
ENSMLUG00000028063 Myotis lucifugus ENSMLUG00000028063 I 0.846
ENSNLEG00000011114 Nomascus leucogenys ENSNLEG00000011114 I 0.871
Ogr06118 Ophisaurus gracilis Ogr06118 I 0.846
ENSONIG00000016360 Oreochromis niloticus ENSONIG00000016360 I 0.846
USF2 Oryctolagus cuniculus ENSOCUG00000026259 I 0.871
USF2 Oryzias latipes ENSORLG00000015114 I 0.846
USF2 Otolemur garnettii ENSOGAG00000001476 I 0.871
ENSOARG00000004745 Ovis aries ENSOARG00000004745 I 0.871
USF2 Pan troglodytes ENSPTRG00000010836 I 0.871
ENSPANG00000011040 Papio anubis ENSPANG00000011040 I 0.871
ENSPSIG00000008600 Pelodiscus sinensis ENSPSIG00000008600 I 0.846
ENSPFOG00000005160 Poecilia formosa ENSPFOG00000005160 I 0.846
Pvit_11612 Pogona vitticeps Pvit_11612 I 0.846
ENSPPYG00000009855 Pongo abelii ENSPPYG00000009855 I 0.871
USF2 Procavia capensis ENSPCAG00000013941 I 0.871
USF2 Pteropus vampyrus ENSPVAG00000004161 I 0.871
USF2 Sus scrofa ENSSSCG00000002885 I 0.871
USF2 Takifugu rubripes ENSTRUG00000005182 I 0.846
usf2.S Xenopus laevis XB-GENE-6253011 I 0.843
ENSXMAG00000006484 Xiphophorus maculatus ENSXMAG00000006484 I 0.846